RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CMYA5Q8N3K9 4069 aa13.83□□□□□ -0.2
SEC13-218ENST00000490283 AP4M1O00189 453 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 LY6G6FQ5SQ64 297 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 SAMD5Q5TGI4 173 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 COMMD1Q8N668 190 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 Q8N6K4 173 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 OR51D1Q8NGF3 324 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 OR56B1Q8NGI3 324 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 FAM3DQ96BQ1 224 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 GFI1Q99684 422 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 ABCG5Q9H222 651 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 HSF4Q9ULV5 492 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 NOTCH1P46531 2555 aa13.82□□□□□ -0.2
SEC13-218ENST00000490283 SOCS1O15524 211 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 RRP9O43818 475 aaKnown RBP13.81□□□□□ -0.2
SEC13-218ENST00000490283 NAPSAO96009 420 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 VEGFCP49767 419 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 CLDN12P56749 244 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
SEC13-218ENST00000490283 LSAMPQ13449 338 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 BEAN1Q3B7T3 259 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 C10orf99Q6UWK7 81 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 ZNF329Q86UD4 541 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 NOL4LQ96MY1 436 aaPredicted RBP13.81□□□□□ -0.2
SEC13-218ENST00000490283 S1PR3Q99500 378 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 C12orf4Q9NQ89 552 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 NDUFB11Q9NX14 153 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 AK3Q9UIJ7 227 aa13.81□□□□□ -0.2
SEC13-218ENST00000490283 A0A0A6YYD4 124 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 ZNF736B4DX44 427 aaPredicted RBP13.8□□□□□ -0.2
SEC13-218ENST00000490283 DENRO43583 198 aaKnown RBP13.8□□□□□ -0.2
SEC13-218ENST00000490283 GPR12P47775 334 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 MMDQ15546 238 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 SSX1Q16384 188 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 C2orf76Q3KRA6 126 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 HES5Q5TA89 166 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 ZNF880Q6PDB4 577 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 STPG2Q8N412 459 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 FAM89BQ8N5H3 189 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 Q8N9W7 124 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 PIPOXQ9P0Z9 390 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 LINC00527Q9UJ94 153 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 RAB22AQ9UL26 194 aa13.8□□□□□ -0.2
SEC13-218ENST00000490283 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 TRAV1-2A0A0B4J238 106 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 NUDT19A8MXV4 375 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 HSPA12AO43301 675 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 SOX6P35712 828 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 HLA-DRB3P79483 266 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 KPRPQ5T749 579 aaPredicted RBP13.79□□□□□ -0.2
SEC13-218ENST00000490283 FAM71F2Q6NXP2 309 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 REC114Q7Z4M0 266 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 CMSS1Q9BQ75 279 aaKnown RBP13.79□□□□□ -0.2
SEC13-218ENST00000490283 ZNF251Q9BRH9 671 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 MRPL20Q9BYC9 149 aaKnown RBP13.79□□□□□ -0.2
SEC13-218ENST00000490283 ZFP57Q9NU63 452 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
SEC13-218ENST00000490283 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 TRDV1A0A1B0GX56 115 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 RAB29O14966 203 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
SEC13-218ENST00000490283 VDAC1P21796 283 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 GALP22466 123 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 ZBTB25P24278 435 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 GADD45AP24522 165 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 PSMB9P28065 219 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 SLC6A1P30531 599 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 OXLD1Q5BKU9 147 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 TEX38Q6PEX7 206 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 ZNF833PQ6ZTB9 187 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 C5orf24Q7Z6I8 188 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 ARHGAP5-AS1Q96IT6 56 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 HDHD3Q9BSH5 251 aaPredicted RBP13.78□□□□□ -0.2
SEC13-218ENST00000490283 PECRQ9BY49 303 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 YTHDF1Q9BYJ9 559 aaKnown RBP13.78□□□□□ -0.2
SEC13-218ENST00000490283 GHITMQ9H3K2 345 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
SEC13-218ENST00000490283 ST8SIA5O15466 376 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 CD3GP09693 182 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 RAB3BP20337 219 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 OR3A3P47888 321 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 RPL23AP62750 156 aaKnown RBP13.77□□□□□ -0.21
SEC13-218ENST00000490283 PNLIPRP3Q17RR3 467 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 CD200R1LQ6Q8B3 271 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 ODF3L1Q8IXM7 274 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 FAM71E2Q8N5Q1 922 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 WFDC9Q8NEX5 89 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 PHF21AQ96BD5 680 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 RAB3CQ96E17 227 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 KIAA1456Q9P272 454 aa13.77□□□□□ -0.21
SEC13-218ENST00000490283 ZNF107Q9UII5 783 aaPredicted RBP13.77□□□□□ -0.21
SEC13-218ENST00000490283 TMEM272A0A1B0GTI8 110 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 METTL21EPA6NDL7 271 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 IFITM5A6NNB3 132 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms