RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 SLC35E3Q7Z769 313 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 FOXRED2Q8IWF2 684 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 OR8H1Q8NGG4 311 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 RASL11BQ9BPW5 248 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 YTHDF1Q9BYJ9 559 aaKnown RBP14.14□□□□□ -0.15
ABCF3-217ENST00000489719 RAB22AQ9UL26 194 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 HSF4Q9ULV5 492 aa14.14□□□□□ -0.15
ABCF3-217ENST00000489719 TRAV1-2A0A0B4J238 106 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 TRDV1A0A1B0GX56 115 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 ZNF736B4DX44 427 aaPredicted RBP14.13□□□□□ -0.15
ABCF3-217ENST00000489719 NAPSAO96009 420 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 SLC35B1P78383 322 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 TCTEX1D4Q5JR98 221 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 KHDC1LQ5JSQ8 128 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 HES5Q5TA89 166 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 MOB1BQ7L9L4 216 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 ZNF329Q86UD4 541 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 Q8N6K4 173 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 OR2AK2Q8NG84 335 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 OR56B1Q8NGI3 324 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 NDUFB11Q9NX14 153 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 AK3Q9UIJ7 227 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 MGAT4AQ9UM21 535 aa14.13□□□□□ -0.15
ABCF3-217ENST00000489719 IGHG2P01859 326 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 TMEM50BP56557 158 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 C10orf99Q6UWK7 81 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 SPARTQ8N0X7 666 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 ARHGAP5-AS1Q96IT6 56 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 NOL4LQ96MY1 436 aaPredicted RBP14.12□□□□□ -0.15
ABCF3-217ENST00000489719 S1PR3Q99500 378 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 ABCG5Q9H222 651 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 LIN7CQ9NUP9 197 aaKnown RBP14.12□□□□□ -0.15
ABCF3-217ENST00000489719 LINC00527Q9UJ94 153 aa14.12□□□□□ -0.15
ABCF3-217ENST00000489719 TRBV6-6A0A0A6YYG2 114 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 G3V4G9 280 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 GALP22466 123 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 PSMB9P28065 219 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 MRPS15P82914 257 aaKnown RBP14.11□□□□□ -0.15
ABCF3-217ENST00000489719 CD200R1LQ6Q8B3 271 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 Q8N9W7 124 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 CMSS1Q9BQ75 279 aaKnown RBP14.11□□□□□ -0.15
ABCF3-217ENST00000489719 GON7Q9BXV9 100 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 PECRQ9BY49 303 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 PLSCR3Q9NRY6 295 aa14.11□□□□□ -0.15
ABCF3-217ENST00000489719 TMEM272A0A1B0GTI8 110 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 AP4M1O00189 453 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 HSPA12AO43301 675 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 PF4P02776 101 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 CD33P20138 364 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 RAB3BP20337 219 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 CEACAM6P40199 344 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 LSAMPQ13449 338 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 UBE2UQ5VVX9 321 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 ODF3L1Q8IXM7 274 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 COMMD1Q8N668 190 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 FCGR1BQ92637 280 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 HDHD3Q9BSH5 251 aaPredicted RBP14.1□□□□□ -0.15
ABCF3-217ENST00000489719 C12orf4Q9NQ89 552 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 PIPOXQ9P0Z9 390 aa14.1□□□□□ -0.15
ABCF3-217ENST00000489719 LINC01548A6NM66 108 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 IFITM5A6NNB3 132 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 FOXI3A8MTJ6 420 aaPredicted RBP14.09□□□□□ -0.15
ABCF3-217ENST00000489719 RAB29O14966 203 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 LDLRAD4O15165 306 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 ZBTB25P24278 435 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 GPR12P47775 334 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 OR3A3P47888 321 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 F2RL1P55085 397 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 OR10A3P58181 314 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 SAMD5Q5TGI4 173 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 C22orf42Q6IC83 251 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 STPG2Q8N412 459 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 NABP2Q9BQ15 211 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 GHITMQ9H3K2 345 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 Q9N2K0 584 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 ZFP57Q9NU63 452 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 SLC23A1Q9UHI7 598 aa14.09□□□□□ -0.15
ABCF3-217ENST00000489719 ST8SIA5O15466 376 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 CD3GP09693 182 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 GADD45AP24522 165 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 SOX6P35712 828 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 HLA-DRB3P79483 266 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 OXLD1Q5BKU9 147 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 ZNF833PQ6ZTB9 187 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 WFDC9Q8NEX5 89 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 RAB3CQ96E17 227 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 ZNF251Q9BRH9 671 aa14.08□□□□□ -0.16
ABCF3-217ENST00000489719 MRPL20Q9BYC9 149 aaKnown RBP14.08□□□□□ -0.16
ABCF3-217ENST00000489719 SAA2-SAA4A0A096LPE2 208 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 SHISA3A0PJX4 238 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 METTL21EPA6NDL7 271 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 TRDCB7Z8K6 153 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 ITGB1BP1O14713 200 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 RRP9O43818 475 aaKnown RBP14.07□□□□□ -0.16
ABCF3-217ENST00000489719 SCTP09683 121 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 SAA2P0DJI9 122 aaPredicted RBP14.07□□□□□ -0.16
ABCF3-217ENST00000489719 ACTBP60709 375 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 MMDQ15546 238 aa14.07□□□□□ -0.16
ABCF3-217ENST00000489719 PNLIPRP3Q17RR3 467 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms