RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PTNP21246 168 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 OPRM1P35372 400 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 OR10A3P58181 314 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 GABARAPL2P60520 117 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 SLC35A2P78381 396 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 ZNF90Q03938 601 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 RELAQ04206 551 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 BSXQ3C1V8 233 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 CCDC121Q6ZUS5 278 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 SSX6Q7RTT6 188 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 MRPL52Q86TS9 123 aaKnown RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 ZBTB8OSQ8IWT0 167 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 SLC35F6Q8N357 371 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 OR4X2Q8NGF9 303 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 FNDC9Q8TBE3 224 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 C10orf105Q8TEF2 133 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 MRPS24Q96EL2 167 aaKnown RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 MND1Q9BWT6 205 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 RAB1BQ9H0U4 201 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 BABAM2Q9NXR7 383 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 NXT1Q9UKK6 140 aaKnown RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 SNX24Q9Y343 169 aa0.39□□□□□ -2.35
SMC4-219ENST00000487747 RBMX2Q9Y388 322 aaKnown RBP0.39□□□□□ -2.35
SMC4-219ENST00000487747 ZNF532Q9HCE3 1301 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 A8MUN3 132 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 B4DEV8 164 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 J3QQQ9 107 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 CSTAP01040 98 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 ZNF728P0DKX0 622 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 ESDP10768 282 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 PSMA1P25786 263 aaKnown RBP0.38□□□□□ -2.35
SMC4-219ENST00000487747 RPL26P61254 145 aaKnown RBP0.38□□□□□ -2.35
SMC4-219ENST00000487747 PDK2Q15119 407 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 UAP1Q16222 522 aaPredicted RBP0.38□□□□□ -2.35
SMC4-219ENST00000487747 MAPK14Q16539 360 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 GLT6D1Q7Z4J2 308 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 OR5K1Q8NHB7 308 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 LHFPL5Q8TAF8 219 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 MRAP2Q96G30 205 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 HBEGFQ99075 208 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 MGLLQ99685 303 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 HINT2Q9BX68 163 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 SPZ1Q9BXG8 430 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 GOLPH3Q9H4A6 298 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 XKR8Q9H6D3 395 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 IFT46Q9NQC8 304 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 TMEM216Q9P0N5 145 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 RPL26L1Q9UNX3 145 aaKnown RBP0.38□□□□□ -2.35
SMC4-219ENST00000487747 ALG5Q9Y673 324 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 ROS1P08922 2347 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 MICAL3Q7RTP6 2002 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 ABCB11O95342 1321 aa0.38□□□□□ -2.35
SMC4-219ENST00000487747 A0A1B0GVG6 124 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 GRIFINA4D1Z8 144 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 OR5K4A6NMS3 321 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 UBFD1O14562 309 aaKnown RBP0.37□□□□□ -2.35
SMC4-219ENST00000487747 IGLV3-27P01718 113 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 C1QCP02747 245 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 NPPCP23582 126 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 CRHBPP24387 322 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 CDK2P24941 298 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 PPP1CCP36873 323 aaKnown RBP0.37□□□□□ -2.35
SMC4-219ENST00000487747 MAGEA12P43365 314 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 OR1E2P47887 323 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 PSMB3P49720 205 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 IDH3GP51553 393 aaPredicted RBP0.37□□□□□ -2.35
SMC4-219ENST00000487747 LINC00313P59037 77 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 FAM3AP98173 230 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 PSG3Q16557 428 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 TRMT12Q53H54 448 aaKnown RBP0.37□□□□□ -2.35
SMC4-219ENST00000487747 CENPWQ5EE01 88 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 UNQ6190/PRO20217Q6UXQ8 127 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 TMEM75Q8N9X5 138 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 GNB1LQ9BYB4 327 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 HAUS4Q9H6D7 363 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 METTL17Q9H7H0 456 aaPredicted RBP0.37□□□□□ -2.35
SMC4-219ENST00000487747 DMAC2Q9NW81 257 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 HHLA2Q9UM44 414 aa0.37□□□□□ -2.35
SMC4-219ENST00000487747 PUS1Q9Y606 427 aaKnown RBP eCLIP0.37□□□□□ -2.35
SMC4-219ENST00000487747 PTPRBP23467 1997 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 MYH11P35749 1972 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 TMSB15BA0A087X1C1 80 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 GOLGA8IPA6NC78 632 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 LINC00862A6NCI5 91 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 C2orf74A8MZ97 194 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 SLC17A3O00476 420 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 GPR171O14626 319 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CDK14O94921 469 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CST4P01036 141 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 ATF1P18846 271 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CCNOP22674 350 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 GADD45AP24522 165 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CD24P25063 80 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CRYBB3P26998 211 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 G6PCP35575 357 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 HINT1P49773 126 aaPredicted RBP0.36□□□□□ -2.35
SMC4-219ENST00000487747 RAP1GDS1P52306 607 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 CTAG1AP78358 180 aa0.36□□□□□ -2.35
SMC4-219ENST00000487747 XIAPP98170 497 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms