RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 DUX4L5P0CJ88 424 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 DUX4L6P0CJ89 424 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 DUX4L7P0CJ90 424 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 IRF2P14316 349 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FGF9P31371 208 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CD80P33681 288 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RORCP51449 518 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ART1P52961 327 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 HNF4GQ14541 408 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TIMM50Q3ZCQ8 353 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 IDNKQ5T6J7 187 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 OR52W1Q6IF63 320 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 DUX4L9Q6RFH8 374 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 GLIPR1L1Q6UWM5 242 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 Q6ZSR3 168 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 C5orf24Q7Z6I8 188 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TMEM104Q8NE00 496 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 SETD6Q8TBK2 473 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 IGFBPL1Q8WX77 278 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 SPSB1Q96BD6 273 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 C10orf35Q96D05 121 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ALKBH7Q9BT30 221 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 C11orf54Q9H0W9 315 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FN3KRPQ9HA64 309 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RCC2Q9P258 522 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 DUX4Q9UBX2 424 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZNF222Q9UK12 451 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 MALRD1Q5VYJ5 2156 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RAI1Q7Z5J4 1906 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 NKX6-3A6NJ46 265 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TMPRSS2O15393 492 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 GYPAP02724 150 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 METTL15P1P0C7V9 234 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 GIFP27352 417 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 GABRA2P47869 451 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RIPPLY3P57055 190 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 OR2B8PP59922 312 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CLEC12BQ2HXU8 276 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 PIGYQ3MUY2 71 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TMEM177Q53S58 311 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 KIAA2026Q5HYC2 2103 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 DHRS7BQ6IAN0 325 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZNF529Q6P280 563 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 BIVMQ86UB2 503 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 LYG1Q8N1E2 194 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 PNLDC1Q8NA58 520 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 BEST4Q8NFU0 473 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 OR5M8Q8NGP6 311 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FAM168AQ92567 244 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RDH5Q92781 318 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CREB3L1Q96BA8 519 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZMAT3Q9HA38 289 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 PGPEP1Q9NXJ5 209 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FOXJ3Q9UPW0 622 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 MRPS28Q9Y2Q9 187 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 V9GY05 133 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 C20orf202A1L168 122 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 LRRC30A6NM36 301 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZNF705EA8MWA4 302 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TMEM178BH3BS89 294 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 K7EP13 123 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 AP4M1O00189 453 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CYB5BO43169 146 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ADAM20O43506 726 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CYB5AP00167 134 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CSTBP04080 98 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 SNRPBP14678 240 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 PAX1P15863 534 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 HTR2CP28335 458 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RAB5CP51148 216 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TESK1Q15569 626 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 TAF9Q16594 264 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 GLT8D1Q68CQ7 371 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 FAM90A1Q86YD7 464 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZNRF1Q8ND25 227 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 BEND2Q8NDZ0 799 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 OR10W1Q8NGF6 305 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 EMG1Q92979 244 aaKnown RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 Q96MF0 132 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 CHST6Q9GZX3 395 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 ZNF701Q9NV72 531 aaPredicted RBP4.49□□□□□ -1.69
CNTN4-216ENST00000484686 RNF7Q9UBF6 113 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 COMMD3Q9UBI1 195 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 WIPI2Q9Y4P8 454 aa4.49□□□□□ -1.69
CNTN4-216ENST00000484686 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 IFITM5A6NNB3 132 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 RNF223E7ERA6 249 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 TRAPPC2LH3BP13 241 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.48□□□□□ -1.69
CNTN4-216ENST00000484686 SMAD7O15105 426 aaKnown RBP4.48□□□□□ -1.69
CNTN4-216ENST00000484686 SIVA1O15304 175 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 CCL25O15444 150 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 PHF1O43189 567 aaPredicted RBP4.48□□□□□ -1.69
CNTN4-216ENST00000484686 RP2O75695 350 aa4.48□□□□□ -1.69
CNTN4-216ENST00000484686 FSTP19883 344 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms