RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 RBMXL3Q8N7X1 1067 aaKnown RBP6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 OR5C1Q8NGR4 320 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 OR8U1Q8NH10 309 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 OR51H1Q8NH63 302 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM57AQ8TBR7 257 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 EDARADDQ8WWZ3 215 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 MUCL1Q96DR8 90 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 ATP5SQ99766 215 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 MAGT1Q9H0U3 335 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 RAB9BQ9NP90 201 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 COQ3Q9NZJ6 369 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 RNF150Q9ULK6 438 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 KCNS2Q9ULS6 477 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 PPP1R3CQ9UQK1 317 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 MMP24Q9Y5R2 645 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 CFAP54Q96N23 3096 aa6.2□□□□□ -1.42
SHROOM3-206ENST00000484236 IGLV3-9A0A075B6K5 115 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 A0A0G2JRQ6 117 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM157AC9JC47 383 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 MKRN2OSH3BPM6 223 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 KLK10O43240 276 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 SPINT2O43291 252 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 TMEM50AO95807 157 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 IFNA5P01569 189 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 IGKV1-39P01597 117 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 IGKV1-5P01602 117 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HBZP02008 142 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HBE1P02100 147 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 IGKV1D-39P04432 117 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 ATF4P18848 351 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 GZMHP20718 246 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PAX6P26367 422 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PRDX2P32119 198 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 CD80P33681 288 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 GATA4P43694 442 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 DYNLT3P51808 116 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 KLF3P57682 345 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 SELENOVP59797 346 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HBG1P69891 147 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HBG2P69892 147 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 COL10A1Q03692 680 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF616Q08AN1 781 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 EIF4EBP1Q13541 118 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 GUCA2BQ16661 112 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF585BQ52M93 769 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 KRBOX4Q5JUW0 171 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PRAMEF6Q5VXH4 476 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF474Q6S9Z5 364 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM180AQ6UWF9 173 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 CLEC9AQ6UXN8 241 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF826PQ6ZT77 177 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PRR18Q8N4B5 295 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HSD17B11Q8NBQ5 300 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 OR2G3Q8NGZ4 309 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 OR1L1Q8NH94 360 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 CD300LFQ8TDQ1 290 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 LRRC29Q8WV35 223 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 COQ2Q96H96 371 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 SNX22Q96L94 193 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 HSD17B10Q99714 261 aaKnown RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PSMG3Q9BT73 122 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 SCRT1Q9BWW7 348 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 PARD6GQ9BYG4 376 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 UNKLQ9H9P5 680 aaKnown RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 MSL2Q9HCI7 577 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 CACNG5Q9UF02 275 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 NDRG3Q9UGV2 375 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM96BQ9Y3D0 163 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 EP300Q09472 2414 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 KIAA2026Q5HYC2 2103 aa6.19□□□□□ -1.42
SHROOM3-206ENST00000484236 URB1O60287 2271 aaKnown RBP6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 TRAV1-1A0A0B4J248 108 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 TRAV39A0A0B4J263 110 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM90A9PA6NNJ1 464 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 M0R1B8 84 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 ITGB1BP1O14713 200 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 MGST3O14880 152 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 WNT9BO14905 357 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF737O75373 536 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 P0C879 139 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 SPINK2P20155 84 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 EPHA1P21709 976 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 GABRA2P47869 451 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 ZNF83P51522 516 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 TLE4Q04727 773 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 AESQ08117 197 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 CLINT1Q14677 625 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 TMEM30BQ3MIR4 351 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 AKR1C8PQ5T2L2 129 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 TMEM182Q6ZP80 229 aaPredicted RBP6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 Q6ZRM9 215 aa6.18□□□□□ -1.42
SHROOM3-206ENST00000484236 ODF3L1Q8IXM7 274 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms