RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PXT1Q8NFP0 134 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 OR10AC1Q8NH08 325 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 RFESDQ8TAC1 157 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 CNIH3Q8TBE1 160 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 MRGPRDQ8TDS7 321 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 C4orf3Q8WVX3 66 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 TRUB1Q8WWH5 349 aaKnown RBP4.59□□□□□ -1.67
CSDE1-207ENST00000483407 GPER1Q99527 375 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 ASCL2Q99929 193 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 RASL11BQ9BPW5 248 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 FAM192AQ9GZU8 254 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 RIBC2Q9H4K1 309 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 IMPAD1Q9NX62 359 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-207ENST00000483407 SMAD5-AS1Q9Y6J3 95 aa4.59□□□□□ -1.67
CSDE1-207ENST00000483407 RYR2Q92736 4967 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TENM3Q9P273 2699 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 A0A1W2PPE3 182 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM30CPA0ZSE6 113 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TMEM212A6NML5 194 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 OR4C45A6NMZ5 311 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 J3QLW9 94 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 SDCBPO00560 298 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TXNL1O43396 289 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 MOSP00540 346 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 IGHG4P01861 327 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 OR8U8P0C7N1 319 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF19P17023 458 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 RAB3AP20336 220 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 CD1BP29016 333 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 SOX6P35712 828 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 POLR2IP36954 125 aaKnown RBP4.58□□□□□ -1.68
CSDE1-207ENST00000483407 REG1BP48304 166 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 SOX2P48431 317 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 NANOS3P60323 173 aaKnown RBP4.58□□□□□ -1.68
CSDE1-207ENST00000483407 MRPL28Q13084 256 aaKnown RBP4.58□□□□□ -1.68
CSDE1-207ENST00000483407 RSU1Q15404 277 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ZSCAN26Q16670 478 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 FAM27D1Q5T7N8 215 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 MEDAGQ5VYS4 303 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 LPCAT4Q643R3 524 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 AMIGO2Q86SJ2 522 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 SATL1Q86VE3 508 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 PARP16Q8N5Y8 322 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ACBD7Q8N6N7 88 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 Q8N9W7 124 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 SETD9Q8NE22 299 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 OR11H1Q8NG94 326 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 OR51A4Q8NGJ6 313 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 OR52M1Q8NGK5 317 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 MUC7Q8TAX7 377 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TNFAIP8L1Q8WVP5 186 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TSEN15Q8WW01 171 aaKnown RBP4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ARL11Q969Q4 196 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 PELI1Q96FA3 418 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 C4orf36Q96KX1 117 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 GABARAPL3Q9BY60 117 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 PALMDQ9NP74 551 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 RAB9BQ9NP90 201 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 DHDHQ9UQ10 334 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 AP4S1Q9Y587 144 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 ORC6Q9Y5N6 252 aa4.58□□□□□ -1.68
CSDE1-207ENST00000483407 TRAV39A0A0B4J263 110 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 LINC01548A6NM66 108 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 J3QRE1 110 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 GABRPO00591 440 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 RRHO14718 337 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 OR7C1O76099 320 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-207ENST00000483407 PSMB8P28062 276 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 PIGYQ3MUY2 71 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 Q3ZCU0 254 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 CASC10Q5T4H9 136 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 LINC00596Q86U02 117 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF429Q86V71 674 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 SYS1Q8N2H4 156 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 STX19Q8N4C7 294 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 LINC00311Q8N616 119 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 Q8N6K4 173 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 C8orf31Q8N9H6 132 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 SUMF2Q8NBJ7 301 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 OR10K1Q8NGX5 313 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 OR5AK2Q8NH90 309 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 PLPPR1Q8TBJ4 325 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 NEK7Q8TDX7 302 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-207ENST00000483407 CENPNQ96H22 339 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-207ENST00000483407 UBE2E2Q96LR5 201 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 KCTD7Q96MP8 289 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 RCHY1Q96PM5 261 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 S1PR3Q99500 378 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 S100A13Q99584 98 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 METTL9Q9H1A3 318 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 GHITMQ9H3K2 345 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 PAK1IP1Q9NWT1 392 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF107Q9UII5 783 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-207ENST00000483407 ZNF580Q9UK33 172 aa4.57□□□□□ -1.68
CSDE1-207ENST00000483407 ST3GAL6Q9Y274 331 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms