RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 C20orf144Q9BQM9 153 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 ZNF436Q9C0F3 470 aaPredicted RBP0.04□□□□□ -2.4
HPS3-205ENST00000478525 EIF5A2Q9GZV4 153 aaKnown RBP0.04□□□□□ -2.4
HPS3-205ENST00000478525 TMEM222Q9H0R3 208 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 ALX4Q9H161 411 aaPredicted RBP0.04□□□□□ -2.4
HPS3-205ENST00000478525 LYRM4Q9HD34 91 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 SDHAF2Q9NX18 166 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 OR5AC2Q9NZP5 309 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 KLK5Q9Y337 293 aaPredicted RBP0.04□□□□□ -2.4
HPS3-205ENST00000478525 C22orf24Q9Y442 160 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 MTCH2Q9Y6C9 303 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 DSCAMO60469 2012 aa0.04□□□□□ -2.4
HPS3-205ENST00000478525 TRAV25A0A0B4J276 109 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CTAGE15A4D2H0 777 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 VPS37CA5D8V6 355 aaPredicted RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 HMSDA8MTL9 139 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 A8MUN3 132 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 GOLGA6L19H0YKK7 550 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 GOLGA8TH3BQL2 631 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 TXNDC9O14530 226 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 FABP7O15540 132 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CRXO43186 299 aaPredicted RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 FGF16O43320 207 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 PDCD6O75340 191 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 VAPBO95292 243 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 PTTG1O95997 202 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 FGF4P08620 206 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 GIMD1P0DJR0 217 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CTSEP14091 401 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 ZNF3P17036 446 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 OPRM1P35372 400 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 PPP1CCP36873 323 aaKnown RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 XCL1P47992 114 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 FXYD7P58549 80 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 RAB2AP61019 212 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 ATP6V0D1P61421 351 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 TSPAN5P62079 268 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 VSNL1P62760 191 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CTAG1AP78358 180 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 EMX1Q04741 257 aaPredicted RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 SPAG1Q07617 926 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 STX4Q12846 297 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 SURF2Q15527 256 aaPredicted RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 RAB11BQ15907 218 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 EXOC3L4Q17RC7 722 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 SLC36A2Q495M3 483 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 C9orf64Q5T6V5 341 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 TMEM220Q6QAJ8 160 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 AMTNQ6UX39 209 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 DGAT2L6Q6ZPD8 337 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 MRPL21Q7Z2W9 205 aaKnown RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 MTERF4Q7Z6M4 381 aaKnown RBP0.03□□□□□ -2.4
HPS3-205ENST00000478525 KTN1-AS1Q86SY8 53 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CTAGE6Q86UF2 777 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 GPX8Q8TED1 209 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 PATE1Q8WXA2 126 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 ASB17Q8WXJ9 295 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CDKL2Q92772 493 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 FMC1Q96HJ9 113 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 LINC01587Q99440 93 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 CIB1Q99828 191 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 UPK3BQ9BT76 320 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 MED18Q9BUE0 208 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 HINT2Q9BX68 163 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 HAUS4Q9H6D7 363 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 C11orf49Q9H6J7 331 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 UBQLN4Q9NRR5 601 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 MS4A12Q9NXJ0 267 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 PLAC8Q9NZF1 115 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 COMMD9Q9P000 198 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 TIMM9Q9Y5J7 89 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 SIPA1L1O43166 1804 aa0.03□□□□□ -2.4
HPS3-205ENST00000478525 ALPK3Q96L96 1907 aa0.03□□□□□ -2.41
HPS3-205ENST00000478525 CHD3Q12873 2000 aaKnown RBP0.03□□□□□ -2.41
HPS3-205ENST00000478525 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
HPS3-205ENST00000478525 TRAV8-7A0A075B6U6 113 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 TRBV6-7A0A0A0MS04 114 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 A0A1W2PQD3 144 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 RFPL4AA6NLU0 287 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 RFPL4AL1F8VTS6 287 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 H3BP45 60 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 SDCBPO00560 298 aaPredicted RBP0.02□□□□□ -2.41
HPS3-205ENST00000478525 BHLHE40O14503 412 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 ITGB1BP1O14713 200 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 LIN7AO14910 233 aaPredicted RBP0.02□□□□□ -2.41
HPS3-205ENST00000478525 COCHO43405 550 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 NOS1APO75052 506 aaPredicted RBP0.02□□□□□ -2.41
HPS3-205ENST00000478525 ZNF737O75373 536 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 ERLIN1O75477 346 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 SOD1P00441 154 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 ZNF728P0DKX0 622 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 ESDP10768 282 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 SPNP16150 400 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 HOXA6P31267 233 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 RCVRNP35243 200 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 OR1E2P47887 323 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 PLTPP55058 493 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 TSPEAR-AS2P59090 65 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 TAS2R30P59541 319 aa0.02□□□□□ -2.41
HPS3-205ENST00000478525 LCN2P80188 198 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms