RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GABRPO00591 440 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ARPC1BO15143 372 aaKnown RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 CHATP28329 748 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 CD40LGP29965 261 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 BDKRB2P30411 391 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 POLR2IP36954 125 aaKnown RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 DDI2Q5TDH0 399 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 LPCAT4Q643R3 524 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ASCL4Q6XD76 172 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF429Q86V71 674 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 OR51A4Q8NGJ6 313 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 RTN4IP1Q8WWV3 396 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 LEAP2Q969E1 77 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 TRIM63Q969Q1 353 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 LGALS12Q96DT0 336 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 S1PR3Q99500 378 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 CST11Q9H112 138 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 KIAA1456Q9P272 454 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 GNG12Q9UBI6 72 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF256Q9Y2P7 627 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ERICH4A6NGS2 130 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 IGHV3-7P01780 117 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ALPLP05186 524 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 GLAP06280 429 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 MYL12AP19105 171 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 SSTR5P35346 364 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 RANBP1P43487 201 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 RBM11P57052 281 aaKnown RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF554Q86TJ5 538 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF555Q8NEP9 628 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 OR10AC1Q8NH08 325 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 UBE2E2Q96LR5 201 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 MLST8Q9BVC4 326 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF107Q9UII5 783 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-214ENST00000477152 RNF150Q9ULK6 438 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 VSIG4Q9Y279 399 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
BRCA1-214ENST00000477152 FAM90A10PA6NDY2 464 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 FAM90A7PA6NKC0 464 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 FAM90A23PA8MXZ1 464 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 IGHG4P01861 327 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 IGF1P05019 195 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 SERPINA2P20848 420 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 SOX2P48431 317 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 TMEM267Q0VDI3 215 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-214ENST00000477152 RIPK1Q13546 671 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 PIGYQ3MUY2 71 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF260Q3ZCT1 412 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 SLC25A48Q6ZT89 311 aaKnown RBP5.68□□□□□ -1.5
BRCA1-214ENST00000477152 CDH26Q8IXH8 852 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 Q8N9W7 124 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 PLPPR1Q8TBJ4 325 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 TMEM106AQ96A25 262 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 PDCD1LG2Q9BQ51 273 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF251Q9BRH9 671 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
BRCA1-214ENST00000477152 TAS2R4Q9NYW5 299 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 LINC00527Q9UJ94 153 aa5.68□□□□□ -1.5
BRCA1-214ENST00000477152 MRPS28Q9Y2Q9 187 aaKnown RBP5.68□□□□□ -1.5
BRCA1-214ENST00000477152 DYNC1I1O14576 645 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 EI24O14681 340 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 LANCL1O43813 399 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ACTL6BO94805 426 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 DCKP27707 260 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 REG1BP48304 166 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF616Q08AN1 781 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF497Q6ZNH5 498 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 Q8N6K4 173 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 TCTEX1D1Q8N7M0 179 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 OR11H1Q8NG94 326 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 OR6Q1Q8NGQ2 317 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 OR1N2Q8NGR9 330 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 OR10K1Q8NGX5 313 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 CCDC107Q8WV48 283 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 KCTD7Q96MP8 289 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 PALMDQ9NP74 551 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ABRACLQ9P1F3 81 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 EXOSC1Q9Y3B2 195 aaKnown RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 LSM4Q9Y4Z0 139 aaKnown RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 IGHV3-72A0A0B4J1Y9 119 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 A0A1W2PPE3 182 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 GEMIN2O14893 280 aaKnown RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 CDRT1O95170 752 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 MT-ND4P03905 459 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF137PP52743 207 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 TAS2R43P59537 309 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 RUNX1Q01196 453 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 MMDQ15546 238 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 SLC22A6Q4U2R8 563 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 YIF1BQ5BJH7 314 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 SYT6Q5T7P8 510 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 PYHIN1Q6K0P9 492 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 RHOXF1Q8NHV9 184 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 FLYWCH2Q96CP2 140 aaKnown RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 RDH12Q96NR8 316 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 OR51J1Q9H342 316 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 ISG20L2Q9H9L3 353 aaKnown RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 FGF20Q9NP95 211 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-214ENST00000477152 GHRLQ9UBU3 117 aa5.67□□□□□ -1.5
BRCA1-214ENST00000477152 STEAP1Q9UHE8 339 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms