RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 OR8H3Q8N146 312 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 CFHR4Q92496 578 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 GHITMQ9H3K2 345 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 CCDC59Q9P031 241 aaKnown RBP13.62□□□□□ -0.23
SCAF11-206ENST00000474828 ANAPC10Q9UM13 185 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 TCF19Q9Y242 345 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 HILPDAQ9Y5L2 63 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 TENM1Q9UKZ4 2725 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 STAB1Q9NY15 2570 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 FABP7O15540 132 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 NDUFA7O95182 113 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 IGHV3-7P01780 117 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 HLA-DQB1P01920 261 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 ZBTB25P24278 435 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 PPP1CCP36873 323 aaKnown RBP13.61□□□□□ -0.23
SCAF11-206ENST00000474828 GNG10P50151 68 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 MRPS15P82914 257 aaKnown RBP13.61□□□□□ -0.23
SCAF11-206ENST00000474828 ARFRP1Q13795 201 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 OR10X1Q8NGY0 326 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 PHF21AQ96BD5 680 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 IFI27L2Q9H2X8 130 aa13.61□□□□□ -0.23
SCAF11-206ENST00000474828 A0A075B6Q4 140 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 A0A1W2PPE3 182 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 BTBD17A6NE02 478 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 LANCL1O43813 399 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 EIF4EP06730 217 aaKnown RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 RELBQ01201 579 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 EBI3Q14213 229 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 MZT2AQ6P582 158 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 CCBE1Q6UXH8 406 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 OR10V1Q8NGI7 309 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 ZNF251Q9BRH9 671 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 ABHD14AQ9BUJ0 271 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 SLIRPQ9GZT3 109 aaKnown RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 NXF2Q9GZY0 626 aaKnown RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 C1RLQ9NZP8 487 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 ZNF230Q9UIE0 474 aaPredicted RBP13.6□□□□□ -0.23
SCAF11-206ENST00000474828 MMP24Q9Y5R2 645 aa13.6□□□□□ -0.23
SCAF11-206ENST00000474828 HSD17B6O14756 317 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 TXNL1O43396 289 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 TSPAN9O75954 239 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 GAPDHP04406 335 aaKnown RBP13.59□□□□□ -0.23
SCAF11-206ENST00000474828 GSTT2P0CG29 244 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 ELK1P19419 428 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 BRS3P32247 399 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 TALDO1P37837 337 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 ARHGDIBP52566 201 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 TAS2R20P59543 309 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 GNG2P59768 71 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 IL1F10Q8WWZ1 152 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 TOMM40LQ969M1 308 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 RPEQ96AT9 228 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 PARP12Q9H0J9 701 aaKnown RBP13.59□□□□□ -0.23
SCAF11-206ENST00000474828 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 SLC23A1Q9UHI7 598 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 PITPNC1Q9UKF7 332 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 GAB2Q9UQC2 676 aa13.59□□□□□ -0.23
SCAF11-206ENST00000474828 IGHV1-3A0A0C4DH29 117 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 HPGDSO60760 199 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 CTXN2P0C2S0 81 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 NAT1P18440 290 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 IL3RAP26951 378 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 SOX6P35712 828 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 CEACAM6P40199 344 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 RAB13P51153 203 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 IGSF11Q5DX21 431 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 HOGA1Q86XE5 327 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 OR2AK2Q8NG84 335 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 EDARADDQ8WWZ3 215 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 C11orf54Q9H0W9 315 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-206ENST00000474828 MIXL1Q9H2W2 232 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 RAB18Q9NP72 206 aa13.58□□□□□ -0.24
SCAF11-206ENST00000474828 TIMM23O14925 209 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 CHST1O43916 411 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 PROP1O75360 226 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 CBX5P45973 191 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 CNIH2Q6PI25 160 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 IZUMO1Q8IYV9 350 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 MAFIPQ8WZ33 124 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 RANBP3Q9H6Z4 567 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-206ENST00000474828 ABCB10Q9NRK6 738 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 PIPOXQ9P0Z9 390 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 ANXA10Q9UJ72 324 aa13.57□□□□□ -0.24
SCAF11-206ENST00000474828 SMIM31A0A1B0GVY4 71 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms