RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C1QL4Q86Z23 238 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 SPARTQ8N0X7 666 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 ABHD14AQ9BUJ0 271 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 YTHDF1Q9BYJ9 559 aaKnown RBP8.86□□□□□ -0.99
CKS1B-206ENST00000474215 PLSCR3Q9NRY6 295 aa8.86□□□□□ -0.99
CKS1B-206ENST00000474215 TSSC4Q9Y5U2 329 aaPredicted RBP8.86□□□□□ -0.99
CKS1B-206ENST00000474215 TRBV6-6A0A0A6YYG2 114 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 TRDV1A0A1B0GX56 115 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 FOXI3A8MTJ6 420 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-206ENST00000474215 SERPINE3A8MV23 424 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 LDLRAD4O15165 306 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 IGHG2P01859 326 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 GALP22466 123 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 VEGFCP49767 419 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 TMEM50BP56557 158 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 HES5Q5TA89 166 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 UBE2UQ5VVX9 321 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 Q6ZPA2 131 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 SLC35E3Q7Z769 313 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 ODF3L1Q8IXM7 274 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 OR8H1Q8NGG4 311 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 OR56B1Q8NGI3 324 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 SETD6Q8TBK2 473 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 CHPT1Q8WUD6 406 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 IL1F10Q8WWZ1 152 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 NOL4LQ96MY1 436 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-206ENST00000474215 ABCG5Q9H222 651 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
CKS1B-206ENST00000474215 STEAP1Q9UHE8 339 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 AK3Q9UIJ7 227 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 RAB22AQ9UL26 194 aa8.85□□□□□ -0.99
CKS1B-206ENST00000474215 SHISA3A0PJX4 238 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 IFITM5A6NNB3 132 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 G3V4G9 280 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 MYL9P24844 172 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 OR10A3P58181 314 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 LSAMPQ13449 338 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 FOXRED2Q8IWF2 684 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 Q8N9W7 124 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 OR2AK2Q8NG84 335 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 ARHGAP5-AS1Q96IT6 56 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 S1PR3Q99500 378 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 RASL11BQ9BPW5 248 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 HDHD3Q9BSH5 251 aaPredicted RBP8.84□□□□□ -0.99
CKS1B-206ENST00000474215 PECRQ9BY49 303 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 MGAT4AQ9UM21 535 aa8.84□□□□□ -0.99
CKS1B-206ENST00000474215 TMEM272A0A1B0GTI8 110 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 PF4V1P10720 104 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 RAB3BP20337 219 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 ZBTB25P24278 435 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 PSMB9P28065 219 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 CEACAM6P40199 344 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 GPR12P47775 334 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 OR3A3P47888 321 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 F2RL1P55085 397 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 SLC35B1P78383 322 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 PLA2G7Q13093 441 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 KPRPQ5T749 579 aaPredicted RBP8.83□□□□□ -1
CKS1B-206ENST00000474215 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 C22orf42Q6IC83 251 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 COMMD1Q8N668 190 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 WFDC9Q8NEX5 89 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 FCGR1BQ92637 280 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 RBMXL1Q96E39 390 aaKnown RBP8.83□□□□□ -1
CKS1B-206ENST00000474215 NABP2Q9BQ15 211 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 CMSS1Q9BQ75 279 aaKnown RBP8.83□□□□□ -1
CKS1B-206ENST00000474215 Q9N2K0 584 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 SLC23A1Q9UHI7 598 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 LINC00527Q9UJ94 153 aa8.83□□□□□ -1
CKS1B-206ENST00000474215 SAA2-SAA4A0A096LPE2 208 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 AP4M1O00189 453 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 ITGB1BP1O14713 200 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 RAB29O14966 203 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 SCTP09683 121 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 SAA2P0DJI9 122 aaPredicted RBP8.82□□□□□ -1
CKS1B-206ENST00000474215 FGF9P31371 208 aaPredicted RBP8.82□□□□□ -1
CKS1B-206ENST00000474215 BEAN1Q3B7T3 259 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 KHDC1LQ5JSQ8 128 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 STPG2Q8N412 459 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 FAM71E2Q8N5Q1 922 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 RAB3CQ96E17 227 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 GON7Q9BXV9 100 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 MRPL20Q9BYC9 149 aaKnown RBP8.82□□□□□ -1
CKS1B-206ENST00000474215 IFI27L2Q9H2X8 130 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 GHITMQ9H3K2 345 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 ZFP57Q9NU63 452 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 PIPOXQ9P0Z9 390 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 KCNK7Q9Y2U2 307 aa8.82□□□□□ -1
CKS1B-206ENST00000474215 TRDCB7Z8K6 153 aa8.81□□□□□ -1
CKS1B-206ENST00000474215 ST8SIA5O15466 376 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms