RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OR51G1Q8NGK1 321 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 OR10D3Q8NH80 312 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TMEM204Q9BSN7 226 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 RSG1Q9BU20 258 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 ABI3Q9P2A4 366 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 KCNS2Q9ULS6 477 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 SPTBN2O15020 2390 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 A8MWP6 167 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 MPDU1O75352 247 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TIAF1O95411 115 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TUBG1P23258 451 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 B3GALT5-AS1P59052 145 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PPP1CBP62140 327 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PLGLB1Q02325 96 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ACTL10Q5JWF8 245 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TMEM14EPQ6UXP3 125 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ODF3L1Q8IXM7 274 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 MEGF10Q96KG7 1140 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TAAR6Q96RI8 345 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 MRPL37Q9BZE1 423 aaKnown RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 RBKSQ9H477 322 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PPP1R14DQ9NXH3 145 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TNRC6BQ9UPQ9 1833 aaKnown RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 AHCTF1Q8WYP5 2266 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 CLDN1O95832 211 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 AMBPP02760 352 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 RPL23P62829 140 aaKnown RBP5.21□□□□□ -1.57
HERC4-209ENST00000473533 HERPUD1Q15011 391 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 COX19Q49B96 90 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 SPANXN5Q5MJ07 72 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 PCSK4Q6UW60 755 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 GGNQ86UU5 652 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 OR5P3Q8WZ94 311 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 OR4C12Q96R67 309 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 PCDH15Q96QU1 1955 aa5.21□□□□□ -1.57
HERC4-209ENST00000473533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 KIAA1324LA8MWY0 1029 aaPredicted RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 H3BP45 60 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 M0R143 59 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 MT-CO2P00403 227 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 GZMBP10144 247 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR10J1P30954 320 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 PAFAH1B2P68402 229 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 COL10A1Q03692 680 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 C4orf17Q53FE4 359 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 GUSBP11Q6P575 273 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 FAM180AQ6UWF9 173 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR10G9Q8NGN4 311 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR10G7Q8NGN6 311 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR4F5Q8NH21 305 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 RAB1CQ92928 201 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 NINJ1Q92982 152 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 ZNF837Q96EG3 531 aaPredicted RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR4F4Q96R69 305 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 DDA1Q9BW61 102 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 PROK2Q9HC23 129 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 OR6C3Q9NZP0 311 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 HSPB7Q9UBY9 170 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 TRAPPC2LQ9UL33 140 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 FER1L5A0AVI2 2057 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 NCOA6Q14686 2063 aaPredicted RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 KIAA1549Q9HCM3 1950 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 UBE2L5PA0A1B0GUS4 154 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 A0A1B0GV90 55 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 ZNF705GA8MUZ8 300 aaPredicted RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 SH2D1BO14796 132 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 HMGB3O15347 200 aaKnown RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 TRAPPC6AO75865 159 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 CRYABP02511 175 aaKnown RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 GYPAP02724 150 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 IAPPP10997 89 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 SELEP16581 610 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 GDF1P27539 372 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 TNFRSF9Q07011 255 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 LYSMD4Q5XG99 296 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 TRAT1Q6PIZ9 186 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 YRDCQ86U90 279 aaKnown RBP5.21□□□□□ -1.58
HERC4-209ENST00000473533 RHOVQ96L33 236 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 PARLQ9H300 379 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 DLL3Q9NYJ7 618 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 MTCH1Q9NZJ7 389 aa5.21□□□□□ -1.58
HERC4-209ENST00000473533 REV3LO60673 3130 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 MDFIC2A0A1B0GVS7 189 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 A0A1W2PQM1 296 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 C5orf49A4QMS7 147 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 RAB29O14966 203 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TCAPO15273 167 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TMPRSS2O15393 492 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TNFSF12O43508 249 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 PDGFBP01127 241 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 ELLP55199 621 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 ARF1P84077 181 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 GFI1BQ5VTD9 330 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 NUFIP2Q7Z417 695 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 DTX1Q86Y01 620 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 MCEMP1Q8IX19 187 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZNF645Q8N7E2 425 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms