RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 MEIS3P1A6NDR6 274 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 TLCD2A6NGC4 264 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 OTOL1A6NHN0 477 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CXorf49A8MYA2 514 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 FNDC10F2Z333 226 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 LMO7DNF2Z398 122 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 K7ENP7 123 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 APOC4-APOC2K7ER74 178 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 RHODO00212 210 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 RER1O15258 196 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 NDUFA7O95182 113 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 OR2H2O95918 312 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 HLA-DRB1P01911 266 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 C1QAP02745 245 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 TACSTD2P09758 323 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 RPS4Y1P22090 263 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CNTFRP26992 372 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF93P35789 620 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 EFNB2P52799 333 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 EMP1P54849 157 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CLDN6P56747 220 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 TPPP2P59282 170 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CFHR1Q03591 330 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 COL10A1Q03692 680 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 MYBPHQ13203 477 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 Q6ZVL8 140 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CEACAM19Q7Z692 300 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 MEX3DQ86XN8 651 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 TDHQ8IZJ6 230 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 SLC22A18ASQ8N1D0 253 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 PAQR4Q8N4S7 273 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 RBMXL3Q8N7X1 1067 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 ZDHHC22Q8N966 263 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 ZIC4Q8N9L1 334 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 Q8NA96 180 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 SLC37A2Q8TED4 501 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 NEIL2Q969S2 332 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 GMPPAQ96IJ6 420 aaPredicted RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 HSD17B10Q99714 261 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 PRADC1Q9BSG0 188 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 TSSK6Q9BXA6 273 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 OR2H1Q9GZK4 316 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 MS4A6AQ9H2W1 248 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 MAGIXQ9H6Y5 334 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 SIGLEC8Q9NYZ4 499 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 CLCF1Q9UBD9 225 aa4.33□□□□□ -1.72
COL3A1-205ENST00000470167 LSM2Q9Y333 95 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 YTHDF2Q9Y5A9 579 aaKnown RBP4.33□□□□□ -1.72
COL3A1-205ENST00000470167 C4AP0C0L4 1744 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 C4BP0C0L5 1744 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 C3P01024 1663 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SMIM28A0A1B0GU29 152 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 LOC102725191A0A1B0GVB3 256 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 M0R1X1 148 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 FXYD1O00168 92 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ENSAO43768 121 aaKnown RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 REM1O75628 298 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 CYB5AP00167 134 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 HRASP01112 189 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 KRASP01116 189 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 P04436 131 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 DANCRP0C864 163 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TFPIP10646 304 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 PI3P19957 117 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 NTF3P20783 257 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 DRD3P35462 400 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 H2BFSP57053 126 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 RPL31P62899 125 aaKnown RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SEC11AP67812 179 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ADAM8P78325 824 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 CD164Q04900 197 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 Q0VG73 95 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 HSPB3Q12988 150 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 CATR1Q13166 79 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF146Q15072 292 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 SPATA45Q537H7 98 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 BVES-AS1Q5T3Y7 98 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 Q6AWC8 147 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ZCCHC23Q6ZST2 131 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 Q6ZUT4 128 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 LRP11Q86VZ4 500 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 OR4N5Q8IXE1 308 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 TOMM5Q8N4H5 51 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF808Q8N4W9 903 aaPredicted RBP4.32□□□□□ -1.72
COL3A1-205ENST00000470167 LINC00471Q8N535 108 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 C11orf44Q8N8P7 122 aa4.32□□□□□ -1.72
COL3A1-205ENST00000470167 OR2M3Q8NG83 312 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms