RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 C5orf56Q8N8D9 126 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 ZNF439Q8NDP4 499 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 RAB3CQ96E17 227 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
CLRN1-204ENST00000468836 YPEL2Q96QA6 119 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
CLRN1-204ENST00000468836 RASL11BQ9BPW5 248 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 PECRQ9BY49 303 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
CLRN1-204ENST00000468836 A0A075B6Q4 140 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 TCRBV4S1A1TA0A5B7 111 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 LANCL1O43813 399 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 NAPSAO96009 420 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 ZBTB25P24278 435 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 ZNF134P52741 427 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 ZNF137PP52743 207 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 SLC35B1P78383 322 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 NEDD8Q15843 81 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 FAM89BQ8N5H3 189 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 OR8H1Q8NGG4 311 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 EDARADDQ8WWZ3 215 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 CYYR1Q96J86 154 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 S1PR3Q99500 378 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
CLRN1-204ENST00000468836 VCX3AQ9NNX9 186 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 PIPOXQ9P0Z9 390 aa10.34□□□□□ -0.75
CLRN1-204ENST00000468836 SMIM30A4D0T7 59 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 KCNAB3O43448 404 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 RRP9O43818 475 aaKnown RBP10.33□□□□□ -0.76
CLRN1-204ENST00000468836 AMY1AP04745 511 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 AMY2AP04746 511 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 RAB6AP20340 208 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 TALDO1P37837 337 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 ARL6IP1Q15041 203 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 KCTD21Q4G0X4 260 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 CHPT1Q8WUD6 406 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 KCTD7Q96MP8 289 aa10.33□□□□□ -0.76
CLRN1-204ENST00000468836 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
CLRN1-204ENST00000468836 TXNL4BQ9NX01 149 aaKnown RBP10.33□□□□□ -0.76
CLRN1-204ENST00000468836 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
CLRN1-204ENST00000468836 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 NOTOA8MTQ0 251 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 RAB29O14966 203 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 ST8SIA5O15466 376 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 PF4P02776 101 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
CLRN1-204ENST00000468836 FGF9P31371 208 aaPredicted RBP10.32□□□□□ -0.76
CLRN1-204ENST00000468836 DEFA6Q01524 100 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 LSAMPQ13449 338 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 EBI3Q14213 229 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 MMDQ15546 238 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 ZNF880Q6PDB4 577 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 C5orf24Q7Z6I8 188 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 TPRA1Q86W33 373 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 OR10R2Q8NGX6 335 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 PHF21AQ96BD5 680 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 ZNF251Q9BRH9 671 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 CHCHD6Q9BRQ6 235 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 GON7Q9BXV9 100 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 MRPL20Q9BYC9 149 aaKnown RBP10.32□□□□□ -0.76
CLRN1-204ENST00000468836 ATG5Q9H1Y0 275 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 Q9N2K0 584 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 KIAA1456Q9P272 454 aa10.32□□□□□ -0.76
CLRN1-204ENST00000468836 KIAA2026Q5HYC2 2103 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 LOC100506127A0A0U1RQW1 187 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 SHISA3A0PJX4 238 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 FOXI3A8MTJ6 420 aaPredicted RBP10.31□□□□□ -0.76
CLRN1-204ENST00000468836 ZNF736B4DX44 427 aaPredicted RBP10.31□□□□□ -0.76
CLRN1-204ENST00000468836 TRDCB7Z8K6 153 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 AP4M1O00189 453 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 LDLRAD4O15165 306 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 SLC2A2P11168 524 aaPredicted RBP10.31□□□□□ -0.76
CLRN1-204ENST00000468836 HIST1H1DP16402 221 aaKnown RBP10.31□□□□□ -0.76
CLRN1-204ENST00000468836 GNB3P16520 340 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 CEACAM6P40199 344 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 TMEM50BP56557 158 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 KIR2DS1Q14954 304 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 PLAC9Q5JTB6 97 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 FAM71F2Q6NXP2 309 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 ABCG5Q9H222 651 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 OR51E2Q9H255 320 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 GHITMQ9H3K2 345 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 OR1A1Q9P1Q5 309 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 DAPK2Q9UIK4 370 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 ZNF221Q9UK13 617 aa10.31□□□□□ -0.76
CLRN1-204ENST00000468836 TET2Q6N021 2002 aaPredicted RBP10.31□□□□□ -0.76
CLRN1-204ENST00000468836 A0A0B4J203 849 aa10.3□□□□□ -0.76
CLRN1-204ENST00000468836 NUDT19A8MXV4 375 aa10.3□□□□□ -0.76
CLRN1-204ENST00000468836 BET1O15155 118 aa10.3□□□□□ -0.76
CLRN1-204ENST00000468836 SCGNO76038 276 aa10.3□□□□□ -0.76
CLRN1-204ENST00000468836 TNFAIP8O95379 198 aa10.3□□□□□ -0.76
CLRN1-204ENST00000468836 IGHG2P01859 326 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms