RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MMP28Q9H239 520 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
SNIP1-202ENST00000468040 TBL2Q9Y4P3 447 aaKnown RBP12.38□□□□□ -0.43
SNIP1-202ENST00000468040 A0A1W2PRD5 423 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 A0A1W2PRF3 423 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 A0A1W2PRM7 423 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 IGHV3-7P01780 117 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 SRD5A1P18405 259 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 HTR1DP28221 377 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 HRH1P35367 487 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 SAA4P35542 130 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 RAB7AP51149 207 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 UTF1Q5T230 341 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 MINOS1Q5TGZ0 78 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 RUSC1-AS1Q66K80 236 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 BRD3OSQ6XYD6 125 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
SNIP1-202ENST00000468040 LYSMD2Q8IV50 215 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-202ENST00000468040 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 TMEM229BQ8NBD8 167 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 ABHD14AQ9BUJ0 271 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 WDR12Q9GZL7 423 aaKnown RBP12.37□□□□□ -0.43
SNIP1-202ENST00000468040 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 MINOS1-NBL1R4GNA1 71 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
SNIP1-202ENST00000468040 TLN2Q9Y4G6 2542 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 PMP2P02689 132 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 EPHA1P21709 976 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 IL3RAP26951 378 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 CEACAM3P40198 252 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 AP3S2P59780 193 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 DYRK1AQ13627 763 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 RNASE10Q5GAN6 216 aaKnown RBP12.36□□□□□ -0.43
SNIP1-202ENST00000468040 CT45A1Q5HYN5 189 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 VAX1Q5SQQ9 334 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 FAM53AQ6NSI3 398 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-202ENST00000468040 OVCH2Q7RTZ1 564 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 CT45A3Q8NHU0 189 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 TRIM63Q969Q1 353 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 GHITMQ9H3K2 345 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 EHFQ9NZC4 300 aa12.36□□□□□ -0.43
SNIP1-202ENST00000468040 A0A1W2PPE3 182 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 ANKRD20A5PA0PJZ0 165 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 ZNF134P52741 427 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 TRIQKQ629K1 86 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 CCDC32Q9BV29 185 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
SNIP1-202ENST00000468040 DPM3Q9P2X0 92 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
SNIP1-202ENST00000468040 SLC31A2O15432 143 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 LANCL1O43813 399 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 CRLF1O75462 422 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 TUSC2O75896 110 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 RAB3DO95716 219 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 CD74P04233 296 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 CD3DP04234 171 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 IFNA6P05013 189 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 NFYAP23511 347 aaPredicted RBP12.34□□□□□ -0.43
SNIP1-202ENST00000468040 CD40LGP29965 261 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 FCGR2CP31995 323 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 RFX2P48378 723 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 INPP1P49441 399 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 PPP5CP53041 499 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 TSPAN5P62079 268 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 MEF2DQ14814 521 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 LYG1Q8N1E2 194 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 TOMM5Q8N4H5 51 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 GIMAP1Q8WWP7 306 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 MALSU1Q96EH3 234 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 PARP12Q9H0J9 701 aaKnown RBP12.34□□□□□ -0.43
SNIP1-202ENST00000468040 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 PIPOXQ9P0Z9 390 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 ZNRD1Q9P1U0 126 aa12.34□□□□□ -0.43
SNIP1-202ENST00000468040 RBM7Q9Y580 266 aaKnown RBP12.34□□□□□ -0.43
SNIP1-202ENST00000468040 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 OOSP1A8MZH6 123 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 M0QYG6 137 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 RAB29O14966 203 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 FBP1P09467 338 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 FAUP35544 74 aaKnown RBP12.33□□□□□ -0.44
SNIP1-202ENST00000468040 ZNF137PP52743 207 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 LSAMPQ13449 338 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 DHRS11Q6UWP2 260 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 LHFPL4Q7Z7J7 247 aa12.33□□□□□ -0.44
SNIP1-202ENST00000468040 TMEM17Q86X19 198 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms