RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CCBE1Q6UXH8 406 aaPredicted RBP11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 RAB2BQ8WUD1 216 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 ACOT12Q8WYK0 555 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 COMMD3Q9UBI1 195 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 SLC23A1Q9UHI7 598 aa11.67□□□□□ -0.54
SQSTM1-205ENST00000464493 TENM1Q9UKZ4 2725 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 HSD17B6O14756 317 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 FABP7O15540 132 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 HSPA12AO43301 675 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 XRCC3O43542 346 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 NDUFA7O95182 113 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 GSTT2P0CG29 244 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 GSTT2BP0CG30 244 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 DTYMKP23919 212 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 CD24P25063 80 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 CEACAM6P40199 344 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 RAG2P55895 527 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 GNG2P59768 71 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 RELBQ01201 579 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 AWAT1Q58HT5 328 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 IZUMO1Q8IYV9 350 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 OR8H3Q8N146 312 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 ST6GALNAC6Q969X2 333 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 BCL7BQ9BQE9 202 aa11.66□□□□□ -0.54
SQSTM1-205ENST00000464493 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 A0A1W2PPI3 338 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 TIMM23O14925 209 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 LPLP06858 475 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 FAM106CPP0CH98 169 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF182P17025 639 aaPredicted RBP11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 REG1BP48304 166 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 ZNF137PP52743 207 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 SPCS2Q15005 226 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 MZT2AQ6P582 158 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 Q6ZS49 121 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 CAPSLQ8WWF8 208 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 RTN4IP1Q8WWV3 396 aaPredicted RBP11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 AP3S1Q92572 193 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 CMTM3Q96MX0 182 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 OR1A1Q9P1Q5 309 aa11.65□□□□□ -0.54
SQSTM1-205ENST00000464493 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 CHST1O43916 411 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 SSX5O60225 188 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 HERPUD1Q15011 391 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 IGSF11Q5DX21 431 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 Q6ZSV7 163 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 TGIF2LXQ8IUE1 241 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 ODF3L1Q8IXM7 274 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 DTX3Q8N9I9 347 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 OR56B4Q8NH76 319 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 CFHR4Q92496 578 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 AUNIPQ9H7T9 357 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 BEX1Q9HBH7 125 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
SQSTM1-205ENST00000464493 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 A0A1B0GUS0 222 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 BET1O15155 118 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 TXNL1O43396 289 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 TSPAN9O75954 239 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 DIRAS3O95661 229 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 APOA1P02647 267 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 MDKP21741 143 aaPredicted RBP11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 SOX6P35712 828 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 TMEM69Q5SWH9 247 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 CABLES2Q9BTV7 478 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 NPFFR1Q9GZQ6 430 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 PARP12Q9H0J9 701 aaKnown RBP11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 GHITMQ9H3K2 345 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 C16orf95Q9H693 158 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 PIPOXQ9P0Z9 390 aa11.63□□□□□ -0.55
SQSTM1-205ENST00000464493 TRBV6-7A0A0A0MS04 114 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 SMIM31A0A1B0GVY4 71 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 RAB29O14966 203 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 LANCL1O43813 399 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 HPGDSO60760 199 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms