RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
ALMS1-202ENST00000464408 NICN1Q9BSH3 213 aa11.3□□□□□ -0.6
ALMS1-202ENST00000464408 RAB9BQ9NP90 201 aa11.3□□□□□ -0.6
ALMS1-202ENST00000464408 FKBP14Q9NWM8 211 aa11.3□□□□□ -0.6
ALMS1-202ENST00000464408 CNOT2Q9NZN8 540 aaKnown RBP11.3□□□□□ -0.6
ALMS1-202ENST00000464408 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
ALMS1-202ENST00000464408 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 IGHV7-81A0A0B4J1V7 117 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 CD1AP06126 327 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 GLAP06280 429 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
ALMS1-202ENST00000464408 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
ALMS1-202ENST00000464408 CHATP28329 748 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 BLVRBP30043 206 aaPredicted RBP11.29□□□□□ -0.6
ALMS1-202ENST00000464408 ECI1P42126 302 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 GNB1P62873 340 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 NDPQ00604 133 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 ZNF833PQ6ZTB9 187 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 C6orf201Q7Z4U5 140 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 C8orf59Q8N0T1 100 aaPredicted RBP11.29□□□□□ -0.6
ALMS1-202ENST00000464408 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 FAAP24Q9BTP7 215 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 ANKRD60Q9BZ19 345 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 PARP12Q9H0J9 701 aaKnown RBP11.29□□□□□ -0.6
ALMS1-202ENST00000464408 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 FBXO7Q9Y3I1 522 aa11.29□□□□□ -0.6
ALMS1-202ENST00000464408 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 ST8SIA5O15466 376 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 HTR2CP28335 458 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 HTD2P86397 168 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 UNC119Q13432 240 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 HMGN3Q15651 99 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 ACSM3Q53FZ2 586 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 C9orf66Q5T8R8 295 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 WWC2-AS2Q96NR7 200 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
ALMS1-202ENST00000464408 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.28□□□□□ -0.6
ALMS1-202ENST00000464408 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
ALMS1-202ENST00000464408 DNAH7Q8WXX0 4024 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 DYNC2H1Q8NCM8 4307 aaKnown RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 I3L521 148 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 NBR2O15453 112 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 YPEL1O60688 119 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 RAMP3O60896 148 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 HLA-DRB1P01911 266 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 C5orf64Q2M2E5 130 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 RBM48Q5RL73 367 aaKnown RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 OGFRL1Q5TC84 451 aaPredicted RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 GLDNQ6ZMI3 551 aaPredicted RBP11.27□□□□□ -0.61
ALMS1-202ENST00000464408 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 YPEL2Q96QA6 119 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 ASCL2Q99929 193 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 CST11Q9H112 138 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 C8orf4Q9NR00 106 aa11.27□□□□□ -0.61
ALMS1-202ENST00000464408 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 SOX15O60248 233 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 OR5H8P0DN80 308 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 MAPK3P27361 379 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-202ENST00000464408 QRFPP83859 136 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 ECSCRQ19T08 205 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 C1orf100Q5SVJ3 147 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 ZNF554Q86TJ5 538 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 NPBQ8NG41 125 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 OR2AK2Q8NG84 335 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 GALMQ96C23 342 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-202ENST00000464408 TMEM59Q9BXS4 323 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 GHRLQ9UBU3 117 aa11.26□□□□□ -0.61
ALMS1-202ENST00000464408 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
ALMS1-202ENST00000464408 FCN1O00602 326 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 NDUFA3O95167 84 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 NAPSAO96009 420 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 CDK1P06493 297 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
ALMS1-202ENST00000464408 DCTN2Q13561 401 aaKnown RBP11.25□□□□□ -0.61
ALMS1-202ENST00000464408 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms