RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LIN7BQ9HAP6 207 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 STEAP1Q9UHE8 339 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 STUB1Q9UNE7 303 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 TSSC4Q9Y5U2 329 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 TRBV6-6A0A0A6YYG2 114 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TCRBV4S1A1TA0A5B7 111 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 IFITM5A6NNB3 132 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 FAM90A9PA6NNJ1 464 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 LEUTXA8MZ59 168 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 OOSP1A8MZH6 123 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 SDCBPO00560 298 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TOR1AO14656 332 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 PDCD5O14737 125 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 LPLP06858 475 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 RAB3BP20337 219 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 GADD45AP24522 165 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 MYL9P24844 172 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 BLVRBP30043 206 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 ZNF137PP52743 207 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 HMGN3Q15651 99 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 NEDD8Q15843 81 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 C2orf76Q3KRA6 126 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TMEM30BQ3MIR4 351 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 MOGAT2Q3SYC2 334 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 ABCA11PQ4W5N1 156 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 C6orf183Q5T699 404 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TRAT1Q6PIZ9 186 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 SLC16A12Q6ZSM3 486 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 C8orf31Q8N9H6 132 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 ST6GALNAC6Q969X2 333 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 ARHGAP5-AS1Q96IT6 56 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 NEDD4LQ96PU5 975 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 SLC25A33Q9BSK2 321 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TAF9BQ9HBM6 251 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 AK3Q9UIJ7 227 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 TRAPPC2LQ9UL33 140 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 HYDINQ4G0P3 5121 aa6.27□□□□□ -1.41
CDC42BPA-210ENST00000462553 H3BUI4 141 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 OR2F2O95006 317 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 DUS4LO95620 317 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CLEC2LP0C7M8 214 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 SMIM18P0DKX4 95 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 SLC2A2P11168 524 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 TGFBR1P36897 503 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 VEGFCP49767 419 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 PSMD7P51665 324 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 ZNF134P52741 427 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 PRRX1P54821 245 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CD69Q07108 199 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 ZNF816Q0VGE8 651 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 MADCAM1Q13477 382 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 Q3ZCU0 254 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CT45A1Q5HYN5 189 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CENPVQ7Z7K6 275 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 ZNF554Q86TJ5 538 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 MRPL41Q8IXM3 137 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 OR8H3Q8N146 312 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 PRR18Q8N4B5 295 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 DRAM1Q8N682 238 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 OR4X2Q8NGF9 303 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 OR10V1Q8NGI7 309 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 OR10X1Q8NGY0 326 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CT45A3Q8NHU0 189 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 TOMM40LQ969M1 308 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 RPEQ96AT9 228 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CREB3L1Q96BA8 519 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 YIPF6Q96EC8 236 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 RBM14Q96PK6 669 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CHCHD6Q9BRQ6 235 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 URM1Q9BTM9 101 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 CENPOQ9BU64 300 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 PECRQ9BY49 303 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 RAB22AQ9UL26 194 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 HSF4Q9ULV5 492 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 KCNK7Q9Y2U2 307 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 AMMECR1Q9Y4X0 333 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 TNCP24821 2201 aa6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 PLECQ15149 4684 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-210ENST00000462553 NOTOA8MTQ0 251 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 RAB27BO00194 218 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 MFNGO00587 321 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 HSD17B6O14756 317 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 SPINT2O43291 252 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 TNFAIP8O95379 198 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 SNRNP70P08621 437 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 CD36P16671 472 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 RAB6AP20340 208 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 SDC2P34741 201 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 PPP1CCP36873 323 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 CEACAM3P40198 252 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 REG1BP48304 166 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 THBS3P49746 956 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 RAB7AP51149 207 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 HLA-DRB3P79483 266 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 HTD2P86397 168 aa6.25□□□□□ -1.41
CDC42BPA-210ENST00000462553 MORN2Q502X0 79 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms