RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RPL31P62899 125 aaKnown RBP17.06■□□□□ 0.32
SNX27-204ENST00000458013 ARL17AQ8IVW1 177 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 ATOH7Q8N100 152 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 OR2V2Q96R30 315 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 ATP1A1-AS1Q5TC04 95 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 CEACAM18A8MTB9 384 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 HOXC4P09017 264 aaPredicted RBP17.06■□□□□ 0.32
SNX27-204ENST00000458013 PSG4Q00888 419 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 MESP2Q0VG99 397 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 SF3B5Q9BWJ5 86 aaKnown RBP17.06■□□□□ 0.32
SNX27-204ENST00000458013 SCN1AP35498 2009 aa17.06■□□□□ 0.32
SNX27-204ENST00000458013 IGHV3-66A0A0C4DH42 116 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 KLF7O75840 302 aaPredicted RBP17.05■□□□□ 0.32
SNX27-204ENST00000458013 HBZP02008 142 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 KIR2DL1P43626 348 aaPredicted RBP17.05■□□□□ 0.32
SNX27-204ENST00000458013 KIR2DL2P43627 348 aaPredicted RBP17.05■□□□□ 0.32
SNX27-204ENST00000458013 PNRC1Q12796 327 aaPredicted RBP17.05■□□□□ 0.32
SNX27-204ENST00000458013 WDFY1Q8IWB7 410 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 SH3BGRL3Q9H299 93 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 PPIAL4EA0A075B759 164 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 PPIAL4DF5H284 164 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 J3QT63 122 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 C1QAP02745 245 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 PPIAL4FP0DN26 164 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 SNAI3Q3KNW1 292 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 TP53RKQ96S44 253 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 HSPB9Q9BQS6 159 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 PPIAL4AQ9Y536 164 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 LDLRAD4O15165 306 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 VDAC1P21796 283 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 ID1P41134 155 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 PRSS53Q2L4Q9 553 aa17.05■□□□□ 0.32
SNX27-204ENST00000458013 A6NDN8 102 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 DPH3Q96FX2 82 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 ZNF714Q96N38 554 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 PF4V1P10720 104 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 MMP16P51512 607 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 SCAND1P57086 179 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 OR1L8Q8NGR8 309 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 WFDC6Q9BQY6 131 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 ATG101Q9BSB4 218 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 CES1P1Q9UKY3 287 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 C16orf97H3BN30 126 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 RAG2P55895 527 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 KCNMB1Q16558 191 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 OR52M1Q8NGK5 317 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 B4DEV8 164 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 TRGC2P03986 189 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 SCGB1A1P11684 91 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 MFAP2P55001 183 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 HERPUD1Q15011 391 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 TM4SF20Q53R12 229 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 DCAF10Q5QP82 559 aa17.04■□□□□ 0.32
SNX27-204ENST00000458013 OR2H2O95918 312 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 MRGPRGQ86SM5 289 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 CHST5Q9GZS9 411 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 A0A1B0GU03 582 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 ZNF735P0CB33 412 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 C1orf185Q5T7R7 199 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 FBXW9Q5XUX1 488 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 PMS2CLQ68D20 193 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 HEXA-AS1Q9H8Q6 139 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 S4R3C0 116 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 GZMHP20718 246 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 IZUMO4Q1ZYL8 232 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 AMELYQ99218 206 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 NHSQ6T4R5 1651 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 IGHV3-35A0A0C4DH35 117 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 CTSBP07858 339 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 SLC22A18ASQ8N1D0 253 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 ZDHHC8Q9ULC8 765 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 FOXS1O43638 330 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 RRN3P1Q2M238 152 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 LSMEM1Q8N8F7 131 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 SGMS2Q8NHU3 365 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
SNX27-204ENST00000458013 MIC13Q5XKP0 118 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 RNF133Q8WVZ7 376 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 SCN9AQ15858 1988 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 PAPPA2Q9BXP8 1791 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 CXorf65A6NEN9 183 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 CD99P14209 185 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 FCGR2BP31994 310 aaPredicted RBP17.02■□□□□ 0.32
SNX27-204ENST00000458013 PKIAP61925 76 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 UBE2V2Q15819 145 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 GCSAMLQ5JQS6 135 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 METTL26Q96S19 204 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 PRSS27Q9BQR3 290 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 ZNFX1Q9P2E3 1918 aaKnown RBP17.02■□□□□ 0.32
SNX27-204ENST00000458013 PLPPR5Q32ZL2 321 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 PQLC2Q6ZP29 291 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 OR4B1Q8NGF8 309 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 ITLN1Q8WWA0 313 aa17.02■□□□□ 0.32
SNX27-204ENST00000458013 RALYQ9UKM9 306 aaKnown RBP17.02■□□□□ 0.32
SNX27-204ENST00000458013 K7N7A8 449 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 NKX2-8O15522 239 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 PGA4P0DJD7 388 aa17.02■□□□□ 0.31
SNX27-204ENST00000458013 PGA5P0DJD9 388 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms