RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 EDARADDQ8WWZ3 215 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 TOMM40LQ969M1 308 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 DIRAS2Q96HU8 199 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 DUX5Q96PT3 197 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 NXF2Q9GZY0 626 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 MIXL1Q9H2W2 232 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 MMP27Q9H306 513 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 ANXA10Q9UJ72 324 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 WNK2Q9Y3S1 2297 aa11.82□□□□□ -0.52
NCKIPSD-207ENST00000453349 KIAA2026Q5HYC2 2103 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 CLDN34H7C241 214 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 GAPDHP04406 335 aaKnown RBP11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 PAX6P26367 422 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 BRS3P32247 399 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 RAB7AP51149 207 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 PLA1AQ53H76 456 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 LYG1Q8N1E2 194 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 GVQW1Q8N7I0 195 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 BEST4Q8NFU0 473 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 ABHD14AQ9BUJ0 271 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 GHITMQ9H3K2 345 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 ESM1Q9NQ30 184 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 RABL2AQ9UBK7 228 aaPredicted RBP11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 RABL2BQ9UNT1 228 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
NCKIPSD-207ENST00000453349 IGKV1D-8A0A087WSZ0 117 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 TRBV6-7A0A0A0MS04 114 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 IGKV1-6A0A0C4DH72 117 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 MEIS3P1A6NDR6 274 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 VGLL3A8MV65 326 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 H3BUX3 64 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 SULT1C2O00338 296 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 ITGB1BP1O14713 200 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 SLC31A2O15432 143 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 S100A5P33763 92 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 ARPC4P59998 168 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 UBA52P62987 128 aaKnown RBP11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 HERPUD1Q15011 391 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 SCPEP1Q9HB40 452 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 RDH8Q9NYR8 311 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 PIPOXQ9P0Z9 390 aa11.8□□□□□ -0.52
NCKIPSD-207ENST00000453349 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 TNFSF8P32971 234 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 RAB13P51153 203 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 DYNLT3P51808 116 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 SRSF2Q01130 221 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZNF816Q0VGE8 651 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 IL18Q14116 193 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 C16orf87Q6PH81 154 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR8H3Q8N146 312 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZFAND2BQ8WV99 257 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 FCAMRQ8WWV6 532 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 GCDHQ92947 438 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 C11orf54Q9H0W9 315 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 BATF3Q9NR55 127 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 NECAP2Q9NVZ3 263 aa11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 RBM7Q9Y580 266 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-207ENST00000453349 FABP12A6NFH5 140 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 A6NHS1 94 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 HSD17B6O14756 317 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 RAB29O14966 203 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 ST8SIA5O15466 376 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 TXNL1O43396 289 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 RBBP9O75884 186 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 CRYBA1P05813 215 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 FCER2P06734 321 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR3A3P47888 321 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 PYHIN1Q6K0P9 492 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 MOB3BQ86TA1 216 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 GPX8Q8TED1 209 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 S1PR3Q99500 378 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 ZNF221Q9UK13 617 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 PITPNC1Q9UKF7 332 aa11.78□□□□□ -0.52
NCKIPSD-207ENST00000453349 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 LANCL1O43813 399 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 FAM106CPP0CH98 169 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 ZNF137PP52743 207 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 DIAPH2-AS1Q14236 149 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 LY6EQ16553 131 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 TGIF2LXQ8IUE1 241 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 H1FOOQ8IZA3 346 aaPredicted RBP11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 PIFOQ8TCI5 191 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 CAPSLQ8WWF8 208 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 RTN4IP1Q8WWV3 396 aaPredicted RBP11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
NCKIPSD-207ENST00000453349 ABHD1Q96SE0 405 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms