RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 EXOSC1Q9Y3B2 195 aaKnown RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 PEX16Q9Y5Y5 336 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 TRAV8-7A0A075B6U6 113 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 G3V318 75 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 OVOL1O14753 267 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 RGS11O94810 467 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 NDUFA3O95167 84 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 LALBAP00709 142 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 MGMTP16455 207 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 FUT3P21217 361 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 RAB9AP51151 201 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 CRIP2P52943 208 aaPredicted RBP8.45□□□□□ -1.06
USP1-204ENST00000452143 GNB1P62873 340 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 ADARB1P78563 741 aaKnown RBP8.45□□□□□ -1.06
USP1-204ENST00000452143 C5orf64Q2M2E5 130 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 ZNF833PQ6ZTB9 187 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 ODF3L1Q8IXM7 274 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 ZNF555Q8NEP9 628 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 NPBQ8NG41 125 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 THRSPQ92748 146 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 PGLYRP3Q96LB9 341 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 Q96M66 194 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 RCHY1Q96PM5 261 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 OR14A2Q96R54 314 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 SLC29A1Q99808 456 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 NABP2Q9BQ15 211 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 MRPL20Q9BYC9 149 aaKnown RBP8.45□□□□□ -1.06
USP1-204ENST00000452143 SELENOIQ9C0D9 397 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 KLK15Q9H2R5 256 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 KIAA1456Q9P272 454 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 ERGIC3Q9Y282 383 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 WSB1Q9Y6I7 421 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 TENM2Q9NT68 2774 aa8.45□□□□□ -1.06
USP1-204ENST00000452143 SAA2-SAA4A0A096LPE2 208 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 TRBV5-7A0A0A0MS05 114 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 YPEL1O60688 119 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 PDCD6O75340 191 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 SAP30O75446 220 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 SAA2P0DJI9 122 aaPredicted RBP8.44□□□□□ -1.06
USP1-204ENST00000452143 BLVRBP30043 206 aaPredicted RBP8.44□□□□□ -1.06
USP1-204ENST00000452143 CAPGP40121 348 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 TAS2R43P59537 309 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP1-204ENST00000452143 DOC2BQ14184 412 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 GNMTQ14749 295 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 PYHIN1Q6K0P9 492 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 LIN54Q6MZP7 749 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 LYPD6Q86Y78 171 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 PQLC1Q8N2U9 271 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 OR2AK2Q8NG84 335 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 YPEL2Q96QA6 119 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 UQCC2Q9BRT2 126 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 ANKRD60Q9BZ19 345 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
USP1-204ENST00000452143 GHRLQ9UBU3 117 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 LRRC42Q9Y546 428 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
USP1-204ENST00000452143 LINC01619G3V211 115 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 CRTAPO75718 401 aaPredicted RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 MAS1P04201 325 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 CNTFRP26992 372 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 MAPK3P27361 379 aaPredicted RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 PPP1CCP36873 323 aaKnown RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 C6orf141Q5SZD1 244 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 SIGIRRQ6IA17 410 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 SBSPONQ8IVN8 264 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 ZNF485Q8NCK3 441 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 OR52L2PQ8NGH6 319 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 MRPL30Q8TCC3 161 aaKnown RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 DCUN1D4Q92564 292 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 GALMQ96C23 342 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 RBMXL1Q96E39 390 aaKnown RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 TMEM80Q96HE8 168 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 OR5B12Q96R08 314 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 TOLLIPQ9H0E2 274 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 BANF2Q9H503 90 aa8.43□□□□□ -1.06
USP1-204ENST00000452143 FOXA2Q9Y261 457 aaPredicted RBP8.43□□□□□ -1.06
USP1-204ENST00000452143 A0A1W2PN81 502 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 UBE2QL1A1L167 161 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 OR5H14A6NHG9 310 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 LGALS1P09382 135 aaKnown RBP8.42□□□□□ -1.06
USP1-204ENST00000452143 FRMD6-AS1P0C7T7 363 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 UBBP0CG47 229 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 GP9P14770 177 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 CHRNA7P36544 502 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 NDPQ00604 133 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 GABPB1Q06547 395 aaPredicted RBP8.42□□□□□ -1.06
USP1-204ENST00000452143 HMGN3Q15651 99 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 ECSCRQ19T08 205 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
USP1-204ENST00000452143 ACSM6Q6P461 480 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
USP1-204ENST00000452143 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms