RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 PLGLAQ15195 96 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 DMKNQ6E0U4 476 aaPredicted RBP10.32□□□□□ -0.76
HMGB3-204ENST00000448905 PYHIN1Q6K0P9 492 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 NPBQ8NG41 125 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 OR2AK2Q8NG84 335 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 THRSPQ92748 146 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
HMGB3-204ENST00000448905 ORAI1Q96D31 301 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 TMEM80Q96HE8 168 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 NEDD4LQ96PU5 975 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 SLC29A1Q99808 456 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 NABP2Q9BQ15 211 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 BANF2Q9H503 90 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 ISYNA1Q9NPH2 558 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 MBNL3Q9NUK0 354 aaKnown RBP10.32□□□□□ -0.76
HMGB3-204ENST00000448905 PIPOXQ9P0Z9 390 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 DIMT1Q9UNQ2 313 aaKnown RBP10.32□□□□□ -0.76
HMGB3-204ENST00000448905 IGHV7-81A0A0B4J1V7 117 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 PDCD6O75340 191 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 MAS1P04201 325 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 GSTP1P09211 210 aaKnown RBP10.31□□□□□ -0.76
HMGB3-204ENST00000448905 FSTP19883 344 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 PPP1CCP36873 323 aaKnown RBP10.31□□□□□ -0.76
HMGB3-204ENST00000448905 TAS2R43P59537 309 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 GNB1P62873 340 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 SMN1Q16637 294 aaKnown RBP10.31□□□□□ -0.76
HMGB3-204ENST00000448905 APH1BQ8WW43 257 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
HMGB3-204ENST00000448905 RITA1Q96K30 269 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 UQCC2Q9BRT2 126 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 ELOVL1Q9BW60 279 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 FAM53CQ9NYF3 392 aa10.31□□□□□ -0.76
HMGB3-204ENST00000448905 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
HMGB3-204ENST00000448905 KIAA2026Q5HYC2 2103 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 TRAV8-7A0A075B6U6 113 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 A0A1W2PN81 502 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 A0A1W2PPK0 400 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 RAB29O14966 203 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 WBP4O75554 376 aaKnown RBP10.3□□□□□ -0.76
HMGB3-204ENST00000448905 OR8U9P0C7N5 309 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 GP9P14770 177 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 SPNP16150 400 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 MAPK3P27361 379 aaPredicted RBP10.3□□□□□ -0.76
HMGB3-204ENST00000448905 BLVRBP30043 206 aaPredicted RBP10.3□□□□□ -0.76
HMGB3-204ENST00000448905 CHRNA7P36544 502 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 OVCH2Q7RTZ1 564 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 OR13C5Q8NGS8 318 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 ABHD5Q8WTS1 349 aa10.3□□□□□ -0.76
HMGB3-204ENST00000448905 MRPL20Q9BYC9 149 aaKnown RBP10.3□□□□□ -0.76
HMGB3-204ENST00000448905 SMPD3Q9NY59 655 aaPredicted RBP10.3□□□□□ -0.76
HMGB3-204ENST00000448905 TRBV5-7A0A0A0MS05 114 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 NDUFA3O95167 84 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 HSPB1P04792 205 aaKnown RBP10.29□□□□□ -0.76
HMGB3-204ENST00000448905 LGALS1P09382 135 aaKnown RBP10.29□□□□□ -0.76
HMGB3-204ENST00000448905 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 UBBP0CG47 229 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 CNTFRP26992 372 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 CX3CL1P78423 397 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 PITPNAQ00169 270 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 ECSCRQ19T08 205 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 TTC23Q5W5X9 447 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 ACSM6Q6P461 480 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 ODF3L1Q8IXM7 274 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 PQLC1Q8N2U9 271 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 IL1F10Q8WWZ1 152 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 RBMXL1Q96E39 390 aaKnown RBP10.29□□□□□ -0.76
HMGB3-204ENST00000448905 Q96M66 194 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 OR14A2Q96R54 314 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 RNF5Q99942 180 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 TOLLIPQ9H0E2 274 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 S100A14Q9HCY8 104 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 GAR1Q9NY12 217 aaKnown RBP10.29□□□□□ -0.76
HMGB3-204ENST00000448905 CLEC2DQ9UHP7 191 aa10.29□□□□□ -0.76
HMGB3-204ENST00000448905 OR5H14A6NHG9 310 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 H7C2Y5 167 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 RRHO14718 337 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 RBBP9O75884 186 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 BAG2O95816 211 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 OR3A3P47888 321 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 SLURP1P55000 103 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 RPS11P62280 158 aaKnown RBP eCLIP10.28□□□□□ -0.76
HMGB3-204ENST00000448905 GNMTQ14749 295 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 AKIRIN2Q53H80 203 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 ACTBL2Q562R1 376 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 ZNF562Q6V9R5 426 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 ANKRD13BQ86YJ7 626 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 SETD9Q8NE22 299 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 MRPL30Q8TCC3 161 aaKnown RBP10.28□□□□□ -0.76
HMGB3-204ENST00000448905 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
HMGB3-204ENST00000448905 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
HMGB3-204ENST00000448905 CHMP1AQ9HD42 196 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms