RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PPIFP30405 207 aaKnown RBP22.03■■□□□ 1.12
CBX4-202ENST00000448310 ZNF260Q3ZCT1 412 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 C6orf141Q5SZD1 244 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 OR10K2Q6IF99 312 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 OR5B12Q96R08 314 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 SULT4A1Q9BR01 284 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 ZNF251Q9BRH9 671 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 PSORS1C1Q9UIG5 152 aa22.03■■□□□ 1.12
CBX4-202ENST00000448310 KIAA0141Q14154 515 aaPredicted RBP22.02■■□□□ 1.12
CBX4-202ENST00000448310 ZNF554Q86TJ5 538 aa22.02■■□□□ 1.12
CBX4-202ENST00000448310 PACRGLQ8N7B6 248 aa22.02■■□□□ 1.12
CBX4-202ENST00000448310 ANKRD60Q9BZ19 345 aa22.02■■□□□ 1.12
CBX4-202ENST00000448310 OR51J1Q9H342 316 aa22.02■■□□□ 1.12
CBX4-202ENST00000448310 SAA2-SAA4A0A096LPE2 208 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 IGHV7-81A0A0B4J1V7 117 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 NBR2O15453 112 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 YPEL1O60688 119 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 CD1AP06126 327 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 SAA2P0DJI9 122 aaPredicted RBP22.01■■□□□ 1.11
CBX4-202ENST00000448310 HTD2P86397 168 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 FAM27D1Q5T7N8 215 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 ASPHD1Q5U4P2 390 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 TMEM65Q6PI78 240 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 ZNF833PQ6ZTB9 187 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 C8orf59Q8N0T1 100 aaPredicted RBP22.01■■□□□ 1.11
CBX4-202ENST00000448310 ZNF491Q8N8L2 437 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 BPIFB6Q8NFQ5 453 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 YPEL2Q96QA6 119 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 CST11Q9H112 138 aa22.01■■□□□ 1.11
CBX4-202ENST00000448310 HLA-DRB1P01911 266 aa22■■□□□ 1.11
CBX4-202ENST00000448310 NHLRC4P0CG21 123 aaPredicted RBP22■■□□□ 1.11
CBX4-202ENST00000448310 MAPK3P27361 379 aaPredicted RBP22■■□□□ 1.11
CBX4-202ENST00000448310 CHATP28329 748 aa22■■□□□ 1.11
CBX4-202ENST00000448310 NANOGP1Q8N7R0 232 aa22■■□□□ 1.11
CBX4-202ENST00000448310 GALMQ96C23 342 aa22■■□□□ 1.11
CBX4-202ENST00000448310 UBE2E2Q96LR5 201 aa22■■□□□ 1.11
CBX4-202ENST00000448310 NEDD4LQ96PU5 975 aa22■■□□□ 1.11
CBX4-202ENST00000448310 ASCL2Q99929 193 aa22■■□□□ 1.11
CBX4-202ENST00000448310 FAAP24Q9BTP7 215 aa22■■□□□ 1.11
CBX4-202ENST00000448310 KCNK15Q9H427 330 aa22■■□□□ 1.11
CBX4-202ENST00000448310 C8orf4Q9NR00 106 aa22■■□□□ 1.11
CBX4-202ENST00000448310 GHRLQ9UBU3 117 aa22■■□□□ 1.11
CBX4-202ENST00000448310 U3KQK5 164 aa22■■□□□ 1.11
CBX4-202ENST00000448310 SORL1Q92673 2214 aa22■■□□□ 1.11
CBX4-202ENST00000448310 TRAV41A0A0B4J266 112 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 I3L521 148 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 RGS11O94810 467 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 BLVRBP30043 206 aaPredicted RBP21.99■■□□□ 1.11
CBX4-202ENST00000448310 GNB1P62873 340 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 HMGN3Q15651 99 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 C5orf64Q2M2E5 130 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 C6orf201Q7Z4U5 140 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 OR2AK2Q8NG84 335 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 OR1N2Q8NGR9 330 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 CHCHD6Q9BRQ6 235 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 IFI27L2Q9H2X8 130 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 VSIG4Q9Y279 399 aa21.99■■□□□ 1.11
CBX4-202ENST00000448310 IGLV1-40P01703 118 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 RCN1Q15293 331 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 ACSM3Q53FZ2 586 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 IL1F10Q8WWZ1 152 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 THRSPQ92748 146 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 PLCXD1Q9NUJ7 323 aa21.98■■□□□ 1.11
CBX4-202ENST00000448310 ZNF256Q9Y2P7 627 aaPredicted RBP21.98■■□□□ 1.11
CBX4-202ENST00000448310 ST8SIA5O15466 376 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 OR8U8P0C7N1 319 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 ZNF616Q08AN1 781 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 LIN54Q6MZP7 749 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 LRRTM1Q86UE6 522 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 NPBQ8NG41 125 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 FBLIM1Q8WUP2 373 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 NICN1Q9BSH3 213 aa21.97■■□□□ 1.11
CBX4-202ENST00000448310 UBBP0CG47 229 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 HTR2CP28335 458 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 RAB9AP51151 201 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 RPS27AP62979 156 aaKnown RBP21.96■■□□□ 1.11
CBX4-202ENST00000448310 NDPQ00604 133 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 GABPB1Q06547 395 aaPredicted RBP21.96■■□□□ 1.11
CBX4-202ENST00000448310 ECSCRQ19T08 205 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 RBM48Q5RL73 367 aaKnown RBP21.96■■□□□ 1.11
CBX4-202ENST00000448310 LY6G6FQ5SQ64 297 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 FAM131AQ6UXB0 335 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 TMED9Q9BVK6 235 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 TMEM59Q9BXS4 323 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 ALX4Q9H161 411 aaPredicted RBP21.96■■□□□ 1.11
CBX4-202ENST00000448310 FKBP14Q9NWM8 211 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 ABRACLQ9P1F3 81 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 KIAA1456Q9P272 454 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 ERGIC3Q9Y282 383 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 FBXO7Q9Y3I1 522 aa21.96■■□□□ 1.11
CBX4-202ENST00000448310 HUWE1Q7Z6Z7 4374 aaKnown RBP21.95■■□□□ 1.1
CBX4-202ENST00000448310 NDUFA3O95167 84 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 LY86O95711 162 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 RUNX1Q01196 453 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 RPL39P5Q59GN2 51 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 SVOPQ8N4V2 548 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 SETD6Q8TBK2 473 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 PARP12Q9H0J9 701 aaKnown RBP21.95■■□□□ 1.1
CBX4-202ENST00000448310 LRRC42Q9Y546 428 aa21.95■■□□□ 1.1
CBX4-202ENST00000448310 STAB2Q8WWQ8 2551 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms