RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 A0A1B0GW64 132 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 DUXBA0A1W2PPF3 345 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 J3QT63 122 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 IFNA17P01571 189 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF816Q0VGE8 651 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 C4orf17Q53FE4 359 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 FBXW9Q5XUX1 488 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 DRAM1Q8N682 238 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 YPEL4Q96NS1 127 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 TINAGQ9UJW2 476 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 ARHGAP21Q5T5U3 1957 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 PSPNO60542 156 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 S100A8P05109 93 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 BCL2L2Q92843 193 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 TVP23CQ96ET8 276 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 ZPBPQ9BS86 351 aa11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 EP300Q09472 2414 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-204ENST00000439977 TRAV20A0A0B4J274 112 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 UBE2L5PA0A1B0GUS4 154 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 DFFBO76075 338 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 TNFSF15O95150 251 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 DEFA4P12838 97 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 CD200P41217 278 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 ALKBH2Q6NS38 261 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 BTNL3Q6UXE8 466 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 OR1L1Q8NH94 360 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 IER2Q9BTL4 223 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 UNKLQ9H9P5 680 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 UFSP2Q9NUQ7 469 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 DMXL1Q9Y485 3027 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 AGFG2O95081 481 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 CLDN1O95832 211 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 TRGC2P03986 189 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 G6PCP35575 357 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 AESQ08117 197 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 GFI1BQ5VTD9 330 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 SLC25A40Q8TBP6 338 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 TCTEX1D2Q8WW35 142 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 ABHD14BQ96IU4 210 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 SEBOXQ9HB31 216 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
HERPUD1-204ENST00000439977 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 EIF2S3P41091 472 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 OR3A1P47881 315 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RAB2AP61019 212 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 PPP1CBP62140 327 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 LTC4SQ16873 150 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF880Q6PDB4 577 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF497Q6ZNH5 498 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF525Q8N782 197 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RCC1LQ96I51 464 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 SSX3Q99909 188 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 CABLES2Q9BTV7 478 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 DDA1Q9BW61 102 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RTL8AQ9BWD3 113 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 OBP2BQ9NPH6 170 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 DOK5Q9P104 306 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 CEACAM1P13688 526 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 MMP9P14780 707 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 ARG2P78540 354 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 TBC1D28Q2M2D7 210 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 SPNS3Q6ZMD2 512 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RBMXL1Q96E39 390 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 ZNF251Q9BRH9 671 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 RP1L1Q8IWN7 2480 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-204ENST00000439977 IGHV3-43A0A0B4J1X8 118 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 IFITM10A6NMD0 228 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 SMPD2O60906 423 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 IGHV3-43DP0DP04 118 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 MPV17P39210 176 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 CLEC12BQ2HXU8 276 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 OR2D2Q9H210 308 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 GP6Q9HCN6 339 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 CLN8Q9UBY8 286 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 TRGV5A0A0B4J1U4 118 aa11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.42□□□□□ -0.58
HERPUD1-204ENST00000439977 PPIHO43447 177 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms