RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TNFAIP8O95379 198 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 MOSP00540 346 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 CD36P16671 472 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 ZBTB25P24278 435 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 TALDO1P37837 337 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF134P52741 427 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 OR10A3P58181 314 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 HLA-DRB3P79483 266 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 IZUMO1Q8IYV9 350 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 C11orf44Q8N8P7 122 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 OR10R2Q8NGX6 335 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 PHF21AQ96BD5 680 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 EAF1Q96JC9 268 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-216ENST00000439475 S1PR3Q99500 378 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 WNT10AQ9GZT5 417 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 ATG5Q9H1Y0 275 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 Q9N2K0 584 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 IGHV3-72A0A0B4J1Y9 119 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 LOC100506127A0A0U1RQW1 187 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 FOXI3A8MTJ6 420 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-216ENST00000439475 SERPINE3A8MV23 424 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 ITGB1BP1O14713 200 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 RAB29O14966 203 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 TMEM127O75204 238 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OPN1MWP04001 364 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OPN1MW2P0DN77 364 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OPN1MW3P0DN78 364 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 PPP1CCP36873 323 aaKnown RBP8.34□□□□□ -1.07
MCF2L-216ENST00000439475 CEACAM6P40199 344 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 SERPINB10P48595 397 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 ARFRP1Q13795 201 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 KIR2DS1Q14954 304 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-216ENST00000439475 FAM71F2Q6NXP2 309 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 Q6ZS46 218 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OR4X2Q8NGF9 303 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 RASL11BQ9BPW5 248 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 CHCHD6Q9BRQ6 235 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 OR51E2Q9H255 320 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 SLC23A1Q9UHI7 598 aa8.34□□□□□ -1.07
MCF2L-216ENST00000439475 TRDCB7Z8K6 153 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 SDC2P34741 201 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 SLC35B1P78383 322 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 GNMTQ14749 295 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 SLC35E3Q7Z769 313 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 C5orf56Q8N8D9 126 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 TSPAN14Q8NG11 270 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 OR4F17Q8NGA8 305 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 FAM110DQ8TAY7 271 aaPredicted RBP8.33□□□□□ -1.08
MCF2L-216ENST00000439475 CHPT1Q8WUD6 406 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 GON7Q9BXV9 100 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 LIN7CQ9NUP9 197 aaKnown RBP8.33□□□□□ -1.08
MCF2L-216ENST00000439475 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
MCF2L-216ENST00000439475 A0A075B6Q4 140 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 TCRBV4S1A1TA0A5B7 111 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 PSMB11A5LHX3 300 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 RAB27BO00194 218 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 KCNAB3O43448 404 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 AMY1AP04745 511 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 AMY2AP04746 511 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SCTP09683 121 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 CD28P10747 220 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SLC2A2P11168 524 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 HIST1H1DP16402 221 aaKnown RBP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 GNB3P16520 340 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 MC5RP33032 325 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SCAND1P57086 179 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 PITPNAQ00169 270 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 MXD1Q05195 221 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 LSAMPQ13449 338 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SRSF7Q16629 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 NSUN5P1Q3KNT7 163 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 TMEM95Q3KNT9 176 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SFXN4Q6P4A7 337 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 C5orf24Q7Z6I8 188 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 CROCCP3Q8IVE0 287 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 OR4A4PQ8NGN8 299 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 CITED2Q99967 270 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 NABP2Q9BQ15 211 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 ZNF251Q9BRH9 671 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 HDHD3Q9BSH5 251 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 ZNF221Q9UK13 617 aa8.32□□□□□ -1.08
MCF2L-216ENST00000439475 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-216ENST00000439475 SMIM30A4D0T7 59 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-216ENST00000439475 MFNGO00587 321 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 FABP7O15540 132 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
MCF2L-216ENST00000439475 TSPAN15O95858 294 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 IGHG2P01859 326 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 CD83Q01151 205 aa8.31□□□□□ -1.08
MCF2L-216ENST00000439475 PLA2G7Q13093 441 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms