RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CDH20Q9HBT6 801 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 CXCL1P09341 107 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 SELEP16581 610 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 PRR18Q8N4B5 295 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 DOK5Q9P104 306 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 ZGRF1Q86YA3 2104 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 SMPD2O60906 423 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 RNF224P0DH78 156 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 HOXA5P20719 270 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 UCP2P55851 309 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 MRPL49Q13405 166 aaKnown RBP11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 UNQ6494/PRO21346Q6UXR6 183 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 WDR86Q86TI4 376 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 OR4D5Q8NGN0 318 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 MAGT1Q9H0U3 335 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 OR51I2Q9H344 312 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 DMRT1Q9Y5R6 373 aa11.75□□□□□ -0.53
PTCHD3-201ENST00000438700 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 IL24Q13007 206 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM185AQ8N0U4 392 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 MALSU1Q96EH3 234 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 BOD1Q96IK1 185 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 TLN1Q9Y490 2541 aaKnown RBP11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 ADAM20O43506 726 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 GPR137BO60478 399 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 TUSC2O75896 110 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 IFNA17P01571 189 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 SEC11BP0C7V7 166 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 PPP1CBP62140 327 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 GNMTQ14749 295 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 P2RY6Q15077 328 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 BEND4Q6ZU67 534 aa11.74□□□□□ -0.53
PTCHD3-201ENST00000438700 DIDO1Q9BTC0 2240 aaKnown RBP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 H0YL77 283 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SIRPB1O00241 398 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 IGKV3-15P01624 115 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 OMGP23515 440 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 TIMP3P35625 211 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 P2RY1P47900 373 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 IL13RA2Q14627 380 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 RHEBQ15382 184 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SOHLH1Q5JUK2 328 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 BHLHA15Q7RTS1 189 aaPredicted RBP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 CXorf65A6NEN9 183 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 J3QT63 122 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 WRBO00258 174 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 DEGS1O15121 323 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SSSCA1O60232 199 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 LMO1P25800 156 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 RAB5CP51148 216 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SRPXP78539 464 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 SCCPDHQ8NBX0 429 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 OR10D4PQ8NGN7 298 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 OR10J5Q8NHC4 309 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 Q8WTZ3 238 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 MUCL1Q96DR8 90 aa11.73□□□□□ -0.53
PTCHD3-201ENST00000438700 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 A0A1B0GV90 55 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 J3QW42 95 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 CDIPTO14735 213 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 CDX1P47902 265 aaPredicted RBP11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 UCNP55089 124 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 PRR30Q53SZ7 412 aaPredicted RBP11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 GPR157Q5UAW9 335 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 LINC00596Q86U02 117 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 PKIBQ9C010 78 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 TREM2Q9NZC2 230 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 OR1A1Q9P1Q5 309 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 TMEM56-RWDD3S4R434 201 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 CACNA1DQ01668 2161 aa11.72□□□□□ -0.53
PTCHD3-201ENST00000438700 TGIF2-C20orf24A0A0A6YYL0 155 aa11.71□□□□□ -0.53
PTCHD3-201ENST00000438700 CDS2O95674 445 aa11.71□□□□□ -0.53
PTCHD3-201ENST00000438700 SLC25A40Q8TBP6 338 aa11.71□□□□□ -0.53
PTCHD3-201ENST00000438700 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
PTCHD3-201ENST00000438700 PRDM13Q9H4Q3 707 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms