RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 MRPS15P82914 257 aaKnown RBP19.69■□□□□ 0.74
RAPGEF1-206ENST00000438647 C9orf152Q5JTZ5 239 aa19.69■□□□□ 0.74
RAPGEF1-206ENST00000438647 TPRA1Q86W33 373 aa19.69■□□□□ 0.74
RAPGEF1-206ENST00000438647 CMSS1Q9BQ75 279 aaKnown RBP19.69■□□□□ 0.74
RAPGEF1-206ENST00000438647 IGHV3-72A0A0B4J1Y9 119 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 METTL21EPA6NDL7 271 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 NOTOA8MTQ0 251 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 LANCL1O43813 399 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 TSPAN15O95858 294 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 GADD45AP24522 165 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 HLA-DRB3P79483 266 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 NEDD8Q15843 81 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 C5orf56Q8N8D9 126 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 PTX4Q96A99 478 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 RAB3CQ96E17 227 aa19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 EAF1Q96JC9 268 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 HDHD3Q9BSH5 251 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF1-206ENST00000438647 CD28P10747 220 aa19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 PLAC9Q5JTB6 97 aa19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 C5orf24Q7Z6I8 188 aa19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 CENPVQ7Z7K6 275 aaPredicted RBP19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 KCTD7Q96MP8 289 aa19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 VWFP04275 2813 aa19.67■□□□□ 0.74
RAPGEF1-206ENST00000438647 SH2D7A6NKC9 451 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 MOSP00540 346 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 PLA2G7Q13093 441 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 Q6ZPA2 131 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 NR2C2APQ86WQ0 139 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR5AU1Q8NGC0 362 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR8H1Q8NGG4 311 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR10R2Q8NGX6 335 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 FAM110DQ8TAY7 271 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR51E2Q9H255 320 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 Q9N2K0 584 aa19.66■□□□□ 0.74
RAPGEF1-206ENST00000438647 CD3GP09693 182 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 NDUFA11Q86Y39 141 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 Q8N6K4 173 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 CHCHD6Q9BRQ6 235 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 VCX3AQ9NNX9 186 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 PIPOXQ9P0Z9 390 aa19.65■□□□□ 0.74
RAPGEF1-206ENST00000438647 NCBP2LA6PVI3 153 aaKnown RBP19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 HSPA12AO43301 675 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 TNFAIP8O95379 198 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 CD36P16671 472 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 ZBTB25P24278 435 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 ARL6IP1Q15041 203 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 FAM71F2Q6NXP2 309 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 ODF3L1Q8IXM7 274 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 EDARADDQ8WWZ3 215 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 GHITMQ9H3K2 345 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 SLC23A1Q9UHI7 598 aa19.64■□□□□ 0.73
RAPGEF1-206ENST00000438647 A0A0B4J203 849 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 SMIM30A4D0T7 59 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 SERPINE3A8MV23 424 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 RAB27BO00194 218 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 ITGB1BP1O14713 200 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 SLC2A2P11168 524 aaPredicted RBP19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 LSAMPQ13449 338 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 MOGAT2Q3SYC2 334 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 ZNF833PQ6ZTB9 187 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 OR4X2Q8NGF9 303 aa19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 CITED2Q99967 270 aaPredicted RBP19.63■□□□□ 0.73
RAPGEF1-206ENST00000438647 A0A087WXM4 84 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 SAA2-SAA4A0A096LPE2 208 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 LOC100506127A0A0U1RQW1 187 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 ZNF736B4DX44 427 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 RAB29O14966 203 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 OPN1MWP04001 364 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 SAA2P0DJI9 122 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 OPN1MW2P0DN77 364 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 OPN1MW3P0DN78 364 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 HIST1H1DP16402 221 aaKnown RBP19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 NSUN5P1Q3KNT7 163 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 TIMM50Q3ZCQ8 353 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 HIST2H2BDQ6DRA6 164 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 SFXN4Q6P4A7 337 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 S1PR3Q99500 378 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 ATG5Q9H1Y0 275 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 IFI27L2Q9H2X8 130 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 LIN7CQ9NUP9 197 aaKnown RBP19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 DAPK2Q9UIK4 370 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 KCNK7Q9Y2U2 307 aa19.62■□□□□ 0.73
RAPGEF1-206ENST00000438647 TRDCB7Z8K6 153 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 MFNGO00587 321 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 ST8SIA5O15466 376 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 SCTP09683 121 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 GNB3P16520 340 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 SDC2P34741 201 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 CD83Q01151 205 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 KIR2DS1Q14954 304 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 SLC35E3Q7Z769 313 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 FOXRED2Q8IWF2 684 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 TSPAN14Q8NG11 270 aa19.61■□□□□ 0.73
RAPGEF1-206ENST00000438647 A0A075B6Q4 140 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 SCGNO76038 276 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 IGHG2P01859 326 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 CEACAM6P40199 344 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 OR3A3P47888 321 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 SERPINB10P48595 397 aa19.6■□□□□ 0.73
RAPGEF1-206ENST00000438647 Q8N9W7 124 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms