RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 FAAP24Q9BTP7 215 aa8.67□□□□□ -1.02
SSBP3-206ENST00000420121 CST11Q9H112 138 aa8.67□□□□□ -1.02
SSBP3-206ENST00000420121 OR2S2Q9NQN1 319 aa8.67□□□□□ -1.02
SSBP3-206ENST00000420121 JPT1Q9UK76 154 aa8.67□□□□□ -1.02
SSBP3-206ENST00000420121 NCBP2LA6PVI3 153 aaKnown RBP8.66□□□□□ -1.02
SSBP3-206ENST00000420121 FOXI3A8MTJ6 420 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-206ENST00000420121 AP4M1O00189 453 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 YPEL1O60688 119 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 RPS25P62851 125 aaKnown RBP8.66□□□□□ -1.02
SSBP3-206ENST00000420121 EGFEM1PQ0D2K5 195 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 MED22Q15528 200 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 HSD17B12Q53GQ0 312 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 NKAPLQ5M9Q1 402 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 GLT8D1Q68CQ7 371 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 FOXRED2Q8IWF2 684 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 OR8H1Q8NGG4 311 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 YPEL2Q96QA6 119 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 ABHD14AQ9BUJ0 271 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 TMEM59Q9BXS4 323 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 ANKRD60Q9BZ19 345 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 LPAR5Q9H1C0 372 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 RAB9BQ9NP90 201 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 ZFP57Q9NU63 452 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 SCN3BQ9NY72 215 aa8.66□□□□□ -1.02
SSBP3-206ENST00000420121 BPNT1O95861 308 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
SSBP3-206ENST00000420121 CRHBPP24387 322 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 CNTFRP26992 372 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 OR3A3P47888 321 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 ZNF833PQ6ZTB9 187 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 FAM89BQ8N5H3 189 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 COMMD1Q8N668 190 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 KLHL30-AS1Q8NEE0 82 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 OR6M1Q8NGM8 313 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 KCNG3Q8TAE7 436 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 UFD1Q92890 307 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 TMEM203Q969S6 136 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 RAX2Q96IS3 184 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 NEDD4LQ96PU5 975 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 ZNF251Q9BRH9 671 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 MRPL20Q9BYC9 149 aaKnown RBP8.65□□□□□ -1.02
SSBP3-206ENST00000420121 PARP12Q9H0J9 701 aaKnown RBP8.65□□□□□ -1.02
SSBP3-206ENST00000420121 ISYNA1Q9NPH2 558 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 ZNF580Q9UK33 172 aa8.65□□□□□ -1.02
SSBP3-206ENST00000420121 SAA2-SAA4A0A096LPE2 208 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 TRBV6-6A0A0A6YYG2 114 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 WI2-2373I1.2A0A1W2PRP0 233 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 SLC17A2O00624 439 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 SOCS1O15524 211 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 RGS10O43665 173 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 DUS4LO95620 317 aaKnown RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 IGHG4P01861 327 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 IGF1P05019 195 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 SAA2P0DJI9 122 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 CPEP16870 476 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 SLC6A1P30531 599 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 TMEM50BP56557 158 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 SLC35B1P78383 322 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 MLLT11Q13015 90 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 PNLIPRP3Q17RR3 467 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 TEX38Q6PEX7 206 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 ZNF695Q8IW36 515 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 MYOZ3Q8TDC0 251 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 GALMQ96C23 342 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 RASL11BQ9BPW5 248 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 HDHD3Q9BSH5 251 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 KCNIP1Q9NZI2 227 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-206ENST00000420121 TPRKBQ9Y3C4 175 aa8.64□□□□□ -1.03
SSBP3-206ENST00000420121 LDLRAD4O15165 306 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 PROP1O75360 226 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 SLC2A2P11168 524 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 PSMB8P28062 276 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 BLVRBP30043 206 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 PPIFP30405 207 aaKnown RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 SOX6P35712 828 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 MYCNOSP40205 109 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 MAP2K4P45985 399 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 CDX1P47902 265 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 ACTBP60709 375 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 FABP5Q01469 135 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 PLA2G7Q13093 441 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 FOXE3Q13461 319 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 KIAA0141Q14154 515 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 P2RY14Q15391 338 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 DEFB136Q30KP8 78 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 PRSS48Q7RTY5 328 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 OR51D1Q8NGF3 324 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 MGLLQ99685 303 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 AGMATQ9BSE5 352 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 AK3Q9UIJ7 227 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 AK6Q9Y3D8 172 aaKnown RBP8.63□□□□□ -1.03
SSBP3-206ENST00000420121 LRRC42Q9Y546 428 aa8.63□□□□□ -1.03
SSBP3-206ENST00000420121 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
SSBP3-206ENST00000420121 SHISA3A0PJX4 238 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms