RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 VEGFCP49767 419 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 C2orf76Q3KRA6 126 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 HES5Q5TA89 166 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 ZNF880Q6PDB4 577 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 Q6ZPA2 131 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 SLC35E3Q7Z769 313 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 IL1F10Q8WWZ1 152 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 NOL4LQ96MY1 436 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-204ENST00000417122 STEAP1Q9UHE8 339 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 HSF4Q9ULV5 492 aa12.37□□□□□ -0.43
ITGB1-204ENST00000417122 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 TRAV1-2A0A0B4J238 106 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 TRDV1A0A1B0GX56 115 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
ITGB1-204ENST00000417122 SERPINE3A8MV23 424 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 PF4V1P10720 104 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 TMEM50BP56557 158 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 CD200R1LQ6Q8B3 271 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 MOB1BQ7L9L4 216 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 ZNF329Q86UD4 541 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 Q8N9W7 124 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 RBMXL1Q96E39 390 aaKnown RBP12.36□□□□□ -0.43
ITGB1-204ENST00000417122 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
ITGB1-204ENST00000417122 ABCG5Q9H222 651 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
ITGB1-204ENST00000417122 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
ITGB1-204ENST00000417122 TMEM272A0A1B0GTI8 110 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 SHISA3A0PJX4 238 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 LDLRAD4O15165 306 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 MYL9P24844 172 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 OR10A3P58181 314 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 LSAMPQ13449 338 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 UBE2UQ5VVX9 321 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 FOXRED2Q8IWF2 684 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 SPARTQ8N0X7 666 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 OR8H1Q8NGG4 311 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 OR56B1Q8NGI3 324 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 S1PR3Q99500 378 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 PECRQ9BY49 303 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 YTHDF1Q9BYJ9 559 aaKnown RBP12.35□□□□□ -0.43
ITGB1-204ENST00000417122 RAB22AQ9UL26 194 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
ITGB1-204ENST00000417122 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 LINC01548A6NM66 108 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
ITGB1-204ENST00000417122 GALP22466 123 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 GPR12P47775 334 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 F2RL1P55085 397 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 PLA2G7Q13093 441 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 STPG2Q8N412 459 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
ITGB1-204ENST00000417122 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 C12orf4Q9NQ89 552 aa12.34□□□□□ -0.43
ITGB1-204ENST00000417122 IFITM5A6NNB3 132 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 AP4M1O00189 453 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 PF4P02776 101 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 RAB3BP20337 219 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 PSMB9P28065 219 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 OR3A3P47888 321 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 SLC35B1P78383 322 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 HLA-DRB3P79483 266 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 C22orf42Q6IC83 251 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 FCGR1BQ92637 280 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 CMSS1Q9BQ75 279 aaKnown RBP12.33□□□□□ -0.44
ITGB1-204ENST00000417122 Q9N2K0 584 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 SLC23A1Q9UHI7 598 aa12.33□□□□□ -0.44
ITGB1-204ENST00000417122 CD33P20138 364 aa12.32□□□□□ -0.44
ITGB1-204ENST00000417122 ZBTB25P24278 435 aa12.32□□□□□ -0.44
ITGB1-204ENST00000417122 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
ITGB1-204ENST00000417122 FAM71F2Q6NXP2 309 aa12.32□□□□□ -0.44
ITGB1-204ENST00000417122 COMMD1Q8N668 190 aa12.32□□□□□ -0.44
ITGB1-204ENST00000417122 ITGB1BP1O14713 200 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 RAB29O14966 203 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 HSPA12AO43301 675 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 SCTP09683 121 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 SOX6P35712 828 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 CEACAM6P40199 344 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 ACTBP60709 375 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 RPL23AP62750 156 aaKnown RBP12.31□□□□□ -0.44
ITGB1-204ENST00000417122 MRPS15P82914 257 aaKnown RBP12.31□□□□□ -0.44
ITGB1-204ENST00000417122 MMDQ15546 238 aa12.31□□□□□ -0.44
ITGB1-204ENST00000417122 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms