RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 RBKSQ9H477 322 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 RBM7Q9Y580 266 aaKnown RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 FAM173AQ9BQD7 235 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 PKIBQ9C010 78 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 TRBV24-1A0A075B6N3 115 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 B4E171 279 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 TGOLN2O43493 480 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 NEURL1O76050 574 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 PGA5P0DJD9 388 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 FABP4P15090 132 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 HIST1H1BP16401 226 aaKnown RBP15.24■□□□□ 0.03
SCARB1-203ENST00000415380 TSPAN7P41732 249 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 BEND4Q6ZU67 534 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 HLA-CQ95604 372 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
SCARB1-203ENST00000415380 LIN7CQ9NUP9 197 aaKnown RBP15.24■□□□□ 0.03
SCARB1-203ENST00000415380 A0A1W2PR80 420 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 FAM166BA8MTA8 275 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 SIRPB1O00241 398 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 OPN1MWP04001 364 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 OPN1MW2P0DN77 364 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 OPN1MW3P0DN78 364 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 WDR25Q64LD2 544 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 C6orf15Q6UXA7 325 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 WDR1O75083 606 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 NDUFS6O75380 124 aaKnown RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 MDKP21741 143 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 MYPOPQ86VE0 399 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 PINX1Q96BK5 328 aaKnown RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 GFOD1Q9NXC2 390 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 TRAPPC2LQ9UL33 140 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 R4GN57 208 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 UBE2L5PA0A1B0GUS4 154 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 ZNF737O75373 536 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 IFNA1P01562 189 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 APLNRP35414 380 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 GPX4P36969 197 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 PLA2G5P39877 138 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 MAGEA5P43359 124 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 ZNF497Q6ZNH5 498 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 NUFIP2Q7Z417 695 aaKnown RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 TAF15Q92804 592 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■■□□ 15
SCARB1-203ENST00000415380 PARD6GQ9BYG4 376 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-203ENST00000415380 CTDSP1Q9GZU7 261 aa15.23■□□□□ 0.03
SCARB1-203ENST00000415380 J3QT63 122 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 DEFA6Q01524 100 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 SLC38A11Q08AI6 406 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 CLN3Q13286 438 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 SPATA46Q5T0L3 261 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 MOB1BQ7L9L4 216 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 SNX22Q96L94 193 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 STRADBQ9C0K7 418 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 B4GALT7Q9UBV7 327 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 LY86O95711 162 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 OR2H2O95918 312 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 IGKV1D-33P01593 117 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 IGKV1-33P01594 117 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 CDH20Q9HBT6 801 aa15.22■□□□□ 0.03
SCARB1-203ENST00000415380 CD81P60033 236 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 ZXDAP98168 799 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 GAMTQ14353 236 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 OR8G2PQ6IF36 304 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 RPP25LQ8N5L8 163 aaKnown RBP15.21■□□□□ 0.03
SCARB1-203ENST00000415380 DRAM1Q8N682 238 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 LHX4Q969G2 390 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 SLC39A9Q9NUM3 307 aa15.21■□□□□ 0.03
SCARB1-203ENST00000415380 CHD3Q12873 2000 aaKnown RBP15.21■□□□□ 0.02
SCARB1-203ENST00000415380 CD55P08174 381 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 HOXA6P31267 233 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 CEACAM6P40199 344 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 HNF4GQ14541 408 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 C3AR1Q16581 482 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 WDR86Q86TI4 376 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 FGFRL1Q8N441 504 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 SMIM7Q9BQ49 75 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 NAT8Q9UHE5 227 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 PRSS50Q9UI38 385 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 LOXL2Q9Y4K0 774 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 DOCK10Q96BY6 2186 aa15.21■□□□□ 0.02
SCARB1-203ENST00000415380 CELSR3Q9NYQ7 3312 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 CER1O95813 267 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 MT-CO3P00414 261 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 ADIRFQ15847 76 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 S100PBPQ96BU1 408 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 TTTY12Q9BZ98 90 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 NCR3LG1Q68D85 454 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 TMEM14EPQ6UXP3 125 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 ZNF600Q6ZNG1 722 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 RHOVQ96L33 236 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 PACRGQ96M98 296 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-203ENST00000415380 HIST1H2BLQ99880 126 aa15.2■□□□□ 0.02
SCARB1-203ENST00000415380 ESPL1Q14674 2120 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 CLDN1O95832 211 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 MEF2BQ02080 365 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-203ENST00000415380 PMS2P11Q13670 270 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 DNLZQ5SXM8 178 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 C16orf82Q7Z2V1 217 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 KMT2EQ8IZD2 1858 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 OR10A7Q8NGE5 316 aa15.19■□□□□ 0.02
SCARB1-203ENST00000415380 OR4X1Q8NH49 305 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms