RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 A0A1B0GU03 582 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 A0A1B0GV90 55 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 CD81P60033 236 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 RPL23AP62750 156 aaKnown RBP8.32□□□□□ -1.08
SS18-203ENST00000415083 RPL30P62888 115 aaKnown RBP8.32□□□□□ -1.08
SS18-203ENST00000415083 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 RNFT1Q5M7Z0 435 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
SS18-203ENST00000415083 TVP23CQ96ET8 276 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
SS18-203ENST00000415083 TET2Q6N021 2002 aaPredicted RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 KIR2DS1A0A191URI9 304 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 BTBD17A6NE02 478 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 ZNF729A6NN14 1252 aaPredicted RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 C1QTNF9BB2RNN3 333 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 SLC25A6P12236 298 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 DEFA4P12838 97 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 FABP4P15090 132 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 KIR2DS4P43632 304 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 RND2P52198 227 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 KIR2DS1Q14954 304 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 LPAL2Q16609 132 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 LRRC75BQ2VPJ9 315 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 WDR25Q64LD2 544 aaPredicted RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 LCN15Q6UWW0 184 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 SLC35E3Q7Z769 313 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 RPP25LQ8N5L8 163 aaKnown RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 Q8N7P7 452 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 ZNF610Q8N9Z0 462 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR10V1Q8NGI7 309 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR10G4Q8NGN3 311 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 IL1F10Q8WWZ1 152 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 CISD1Q9NZ45 108 aaKnown RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 DMRT1Q9Y5R6 373 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR2H2O95918 312 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 TRGC1P0CF51 173 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 GAMTQ14353 236 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 PRSS8Q16651 343 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 ACSM6Q6P461 480 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 C6orf15Q6UXA7 325 aaPredicted RBP8.31□□□□□ -1.08
SS18-203ENST00000415083 MKXQ8IYA7 352 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 PRR18Q8N4B5 295 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR10J5Q8NHC4 309 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR4C12Q96R67 309 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 PSPNO60542 156 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 BCL2P10415 239 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 GZMHP20718 246 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 ACP1P24666 158 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 CD200P41217 278 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 OR8G1Q15617 311 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 AKR1C8PQ5T2L2 129 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 MDP1Q86V88 176 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 NEK7Q8TDX7 302 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 SDF2L1Q9HCN8 221 aa8.31□□□□□ -1.08
SS18-203ENST00000415083 ZDBF2Q9HCK1 2354 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 SIRPB1O00241 398 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 SYNGR2O43760 224 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 CLEC12BQ2HXU8 276 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 ZNF766Q5HY98 468 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 DCAF12Q5T6F0 453 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 DBX2Q6ZNG2 339 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 SCCPDHQ8NBX0 429 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 BCL2L2Q92843 193 aaPredicted RBP8.3□□□□□ -1.08
SS18-203ENST00000415083 FAM173AQ9BQD7 235 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 C12orf49Q9H741 205 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
SS18-203ENST00000415083 GPR179Q6PRD1 2367 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 YKT6O15498 198 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 RAB11AP62491 216 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 C11orf53Q8IXP5 236 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
SS18-203ENST00000415083 RBMXL1Q96E39 390 aaKnown RBP8.3□□□□□ -1.08
SS18-203ENST00000415083 WDR61Q9GZS3 305 aaKnown RBP8.3□□□□□ -1.08
SS18-203ENST00000415083 RBKSQ9H477 322 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 TREM2Q9NZC2 230 aa8.3□□□□□ -1.08
SS18-203ENST00000415083 HSPA12AO43301 675 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 IGHEP01854 428 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 OR1C1Q15619 314 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 PSENENQ9NZ42 101 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 SPRR3Q9UBC9 169 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 HMGB3O15347 200 aaKnown RBP8.29□□□□□ -1.08
SS18-203ENST00000415083 CTXN2P0C2S0 81 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 LINC00696Q6ZRV3 163 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
SS18-203ENST00000415083 CDH20Q9HBT6 801 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 C19orf67A6NJJ6 358 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 WNT9BO14905 357 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
SS18-203ENST00000415083 PGA5P0DJD9 388 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 NPPCP23582 126 aa8.29□□□□□ -1.08
SS18-203ENST00000415083 RPS16P62249 146 aaKnown RBP8.29□□□□□ -1.08
SS18-203ENST00000415083 GNG3P63215 75 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms