RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ZNF707Q96C28 371 aaPredicted RBP16.11■□□□□ 0.17
SHANK3-202ENST00000414786 LYZL2Q7Z4W2 148 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 BEND2Q8NDZ0 799 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 OR2Y1Q8NGV0 311 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 GPBAR1Q8TDU6 330 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 PRNDQ9UKY0 176 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 A0A1W2PS18 150 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 RIPPLY3P57055 190 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 RAC3P60763 192 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 SIGLEC7Q9Y286 467 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 SVILO95425 2214 aa16.11■□□□□ 0.17
SHANK3-202ENST00000414786 TBX21Q9UL17 535 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 ISLRO14498 428 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 SLC25A17O43808 307 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 CDX1P47902 265 aaPredicted RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 RSPO4Q2I0M5 234 aaPredicted RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 MPC1Q9Y5U8 109 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 RBFOX2O43251 390 aaKnown RBP eCLIP16.1■□□□□ 0.173e-7■■■■□ 24.7
SHANK3-202ENST00000414786 EFNB2P52799 333 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 CIRBPQ14011 172 aaKnown RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 TMEM177Q53S58 311 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 SYT11Q9BT88 431 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 AMY1AP04745 511 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 SIGLEC14Q08ET2 396 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 Q6ZNB5 142 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 FOXI3A8MTJ6 420 aaPredicted RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 CTSDP07339 412 aaPredicted RBP16.1■□□□□ 0.17
SHANK3-202ENST00000414786 ZDHHC22Q8N966 263 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 MANBALQ9NQG1 85 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 ZFP30Q9Y2G7 519 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
SHANK3-202ENST00000414786 PDE6DO43924 150 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 RPL27AP46776 148 aaKnown RBP16.09■□□□□ 0.17
SHANK3-202ENST00000414786 MFAP2P55001 183 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 SLC25A42Q86VD7 318 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 CLRN3Q8NCR9 226 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 TMEM101Q96IK0 257 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 SPTBP11277 2137 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
SHANK3-202ENST00000414786 TRGV2A0A075B6R0 118 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 LOC105371242A0A075B767 164 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 B4DEV8 164 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 M0R143 59 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 AKIP1Q9NQ31 210 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 TMEM238LA0A1B0GVL6 79 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 A6NJY4 79 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 C1orf174Q8IYL3 243 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
SHANK3-202ENST00000414786 PRR35P0CG20 571 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 IL11P20809 199 aa16.09■□□□□ 0.17
SHANK3-202ENST00000414786 VGLL1Q99990 258 aa16.08■□□□□ 0.17
SHANK3-202ENST00000414786 MRPL24Q96A35 216 aaKnown RBP16.08■□□□□ 0.17
SHANK3-202ENST00000414786 LINC01587Q99440 93 aa16.08■□□□□ 0.17
SHANK3-202ENST00000414786 SLC35E3Q7Z769 313 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 OR1P1Q8NH06 330 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 PPIAL4CA0A0B4J2A2 164 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 PPIAL4GP0DN37 164 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 LIFP15018 202 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 ABLIM2Q6H8Q1 611 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 ATOH7Q8N100 152 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 RNASEH2CQ8TDP1 164 aaKnown RBP16.08■□□□□ 0.16
SHANK3-202ENST00000414786 SCMH1Q96GD3 660 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 MPC2O95563 127 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 TTC32Q5I0X7 151 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 Q9N2K0 584 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 PRDM6Q9NQX0 595 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 PGPA6NDG6 321 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 SELENOTP62341 195 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 C17orf47Q8NEP4 570 aa16.08■□□□□ 0.16
SHANK3-202ENST00000414786 TRAV1-2A0A0B4J238 106 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 HMX2A2RU54 273 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 PDLIM4P50479 330 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 OR10J1P30954 320 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 IGHV3-11P01762 117 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 FOXB2Q5VYV0 432 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 MRGPRGQ86SM5 289 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 SLC52A3Q9NQ40 469 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 LPAR3Q9UBY5 353 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 SRD5A1P18405 259 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 TMEM170BQ5T4T1 132 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 TDRD6O60522 2096 aaKnown RBP16.07■□□□□ 0.16
SHANK3-202ENST00000414786 KNDC1Q76NI1 1749 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 CXorf1O96002 111 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 MVDP53602 400 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 PNKDQ8N490 385 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 DNASE2BQ8WZ79 361 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 GZMHP20718 246 aa16.07■□□□□ 0.16
SHANK3-202ENST00000414786 LHX8Q68G74 356 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 ZNF385AQ96PM9 386 aaKnown RBP16.06■□□□□ 0.16
SHANK3-202ENST00000414786 NUDT16L1Q9BRJ7 211 aaKnown RBP16.06■□□□□ 0.16
SHANK3-202ENST00000414786 TRGV3P03979 118 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 ESPL1Q14674 2120 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 SMIM4Q8WVI0 70 aa16.06■□□□□ 0.16
SHANK3-202ENST00000414786 TMEFF2Q9UIK5 374 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms