RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 HLA-DRB3P79483 266 aa13.78□□□□□ -0.2
HSPG2-204ENST00000412328 CITED2Q99967 270 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-204ENST00000412328 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
HSPG2-204ENST00000412328 PLEKHJ1Q9NW61 149 aa13.78□□□□□ -0.2
HSPG2-204ENST00000412328 KCNIP1Q9NZI2 227 aa13.78□□□□□ -0.2
HSPG2-204ENST00000412328 STUB1Q9UNE7 303 aa13.78□□□□□ -0.2
HSPG2-204ENST00000412328 RAB27BO00194 218 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 MFNGO00587 321 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 PDCD5O14737 125 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 LANCL1O43813 399 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 CSF1P09603 554 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 MYL9P24844 172 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 CD1BP29016 333 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 PSMD7P51665 324 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 CD83Q01151 205 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 LSAMPQ13449 338 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 LYG1Q8N1E2 194 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 Q8N9W7 124 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 ZNF251Q9BRH9 671 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 Q9N2K0 584 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 C12orf4Q9NQ89 552 aa13.77□□□□□ -0.21
HSPG2-204ENST00000412328 SAA2-SAA4A0A096LPE2 208 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 IGKV1-6A0A0C4DH72 117 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 SMIM30A4D0T7 59 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 SAA2P0DJI9 122 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-204ENST00000412328 SLC2A2P11168 524 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-204ENST00000412328 RAB6AP20340 208 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 HES1Q14469 280 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 NDUFA11Q86Y39 141 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 TGIF2LXQ8IUE1 241 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 FAM71E2Q8N5Q1 922 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 OR56B1Q8NGI3 324 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 GALMQ96C23 342 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 AGMATQ9BSE5 352 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 OR51E2Q9H255 320 aa13.76□□□□□ -0.21
HSPG2-204ENST00000412328 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-204ENST00000412328 WIPF1O43516 503 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 IGHG2P01859 326 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 FAM110DQ8TAY7 271 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-204ENST00000412328 PTX4Q96A99 478 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 MRPL20Q9BYC9 149 aaKnown RBP13.75□□□□□ -0.21
HSPG2-204ENST00000412328 RNF167Q9H6Y7 350 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 OR1A1Q9P1Q5 309 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
HSPG2-204ENST00000412328 ITGB1BP1O14713 200 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 KCNAB3O43448 404 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 OR3A3P47888 321 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 HNF4GQ14541 408 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 ARSJQ5FYB0 599 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-204ENST00000412328 FAM71F2Q6NXP2 309 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 OR2T10Q8NGZ9 312 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 NABP2Q9BQ15 211 aa13.74□□□□□ -0.21
HSPG2-204ENST00000412328 CHMP1AQ9HD42 196 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-204ENST00000412328 LIN7CQ9NUP9 197 aaKnown RBP13.74□□□□□ -0.21
HSPG2-204ENST00000412328 LINC01548A6NM66 108 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 NOTOA8MTQ0 251 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 ST8SIA5O15466 376 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 MOSP00540 346 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 OPN1MWP04001 364 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 SCTP09683 121 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 OPN1MW2P0DN77 364 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 OPN1MW3P0DN78 364 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 HIST1H1DP16402 221 aaKnown RBP13.73□□□□□ -0.21
HSPG2-204ENST00000412328 GADD45AP24522 165 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 NEDD8Q15843 81 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 OR10R2Q8NGX6 335 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 IL1F10Q8WWZ1 152 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 TOLLIPQ9H0E2 274 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 ABCG5Q9H222 651 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
HSPG2-204ENST00000412328 PROP1O75360 226 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 RGS11O94810 467 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 FCGR3AP08637 254 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 F2RL1P55085 397 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 SFXN4Q6P4A7 337 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 TPRA1Q86W33 373 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 OR2AK2Q8NG84 335 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 SETD6Q8TBK2 473 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 RAB3CQ96E17 227 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-204ENST00000412328 S1PR3Q99500 378 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
HSPG2-204ENST00000412328 HSPB9Q9BQS6 159 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.72□□□□□ -0.21
HSPG2-204ENST00000412328 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 MGAT4AQ9UM21 535 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
HSPG2-204ENST00000412328 TRIM64CA6NLI5 447 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 PEX14O75381 377 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 CLEC2LP0C7M8 214 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 GNB3P16520 340 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 SDC2P34741 201 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 RANBP1P43487 201 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 GPR12P47775 334 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
HSPG2-204ENST00000412328 RPL39P5Q59GN2 51 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms