RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 HOXA5P20719 270 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 SCCPDHQ8NBX0 429 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 RCC1LQ96I51 464 aaKnown RBP12.38□□□□□ -0.43
NUCB1-201ENST00000405315 GPR87Q9BY21 358 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 GP6Q9HCN6 339 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 OR14J1Q9UGF5 321 aa12.38□□□□□ -0.43
NUCB1-201ENST00000405315 IGHV3-64DA0A0J9YX35 117 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 CYB5BO43169 146 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 MYPOPQ86VE0 399 aaPredicted RBP12.37□□□□□ -0.43
NUCB1-201ENST00000405315 TOLLIPQ9H0E2 274 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 RNF150Q9ULK6 438 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 SP1P08047 785 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 S100PP25815 95 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 LRRC75BQ2VPJ9 315 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 Q8IYB0 196 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 DRAM1Q8N682 238 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 DOK5Q9P104 306 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 POLDIP2Q9Y2S7 368 aa12.37□□□□□ -0.43
NUCB1-201ENST00000405315 KLF13Q9Y2Y9 288 aaPredicted RBP12.37□□□□□ -0.43
NUCB1-201ENST00000405315 B4DEV8 164 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 C21orf140B9A014 251 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 NXPH2O95156 264 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 CELA3BP08861 270 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 CEACAM6P40199 344 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 ELLP55199 621 aaPredicted RBP12.36□□□□□ -0.43
NUCB1-201ENST00000405315 MBD3L1Q8WWY6 194 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 CDX1P47902 265 aaPredicted RBP12.36□□□□□ -0.43
NUCB1-201ENST00000405315 ERVK11-1P61568 191 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 DEFB127Q9H1M4 99 aa12.36□□□□□ -0.43
NUCB1-201ENST00000405315 ERVS71-1P61550 626 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 PPP1CBP62140 327 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 TMEM41BQ5BJD5 291 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 OR2J1Q9GZK6 312 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 WDR61Q9GZS3 305 aaKnown RBP12.35□□□□□ -0.43
NUCB1-201ENST00000405315 KIAA2026Q5HYC2 2103 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 CDIPTO14735 213 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 SMPD2O60906 423 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 SERF2P84101 59 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 SLC38A11Q08AI6 406 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
NUCB1-201ENST00000405315 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 TMEM164Q5U3C3 297 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 MDS2Q8NDY4 140 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 CA5BP1Q8WTZ4 195 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 GGACTQ9BVM4 153 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 MBNL3Q9NUK0 354 aaKnown RBP12.35□□□□□ -0.43
NUCB1-201ENST00000405315 CELSR3Q9NYQ7 3312 aa12.35□□□□□ -0.43
NUCB1-201ENST00000405315 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 CEBPZOSA8MTT3 80 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 KLRC4-KLRK1H3BQV0 150 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 SH2D1BO14796 132 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BKO60814 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BJP06899 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 PGA5P0DJD9 388 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BOP23527 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BBP33778 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 MPLP40238 635 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 CEBPDP49716 269 aaPredicted RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BDP58876 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BCP62807 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST2H2BEQ16778 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 C1orf87Q8N0U7 546 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BHQ93079 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BNQ99877 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 HIST1H2BMQ99879 126 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 IL17BQ9UHF5 180 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 WIPI2Q9Y4P8 454 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 TRGC2P03986 189 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 ZNF883P0CG24 379 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 S100A2P29034 98 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 IDH3GP51553 393 aaPredicted RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 ALKBH6Q3KRA9 238 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 FGFRL1Q8N441 504 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 CDH20Q9HBT6 801 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 VAX2Q9UIW0 290 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 DIDO1Q9BTC0 2240 aaKnown RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 FAM186AA6NE01 2351 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 CLDN1O95832 211 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
NUCB1-201ENST00000405315 IFNA1P01562 189 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 GRPP07492 148 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 ZNF146Q15072 292 aa12.34□□□□□ -0.43
NUCB1-201ENST00000405315 OR2B11Q5JQS5 317 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms