RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 PF4V1P10720 104 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 CD200R1LQ6Q8B3 271 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 C10orf99Q6UWK7 81 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 FOXRED2Q8IWF2 684 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 Q8N9W7 124 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 OR51D1Q8NGF3 324 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 ABCG5Q9H222 651 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 V9GY05 133 aa11.76□□□□□ -0.53
SMIM11A-203ENST00000399299 TRAV1-2A0A0B4J238 106 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 A0A1W2PRX2 142 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 ZNF736B4DX44 427 aaPredicted RBP11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 LDLRAD4O15165 306 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 SOCS1O15524 211 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 GALP22466 123 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 LSAMPQ13449 338 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 Q6ZPA2 131 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 C5orf24Q7Z6I8 188 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 ODF3L1Q8IXM7 274 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 COMMD1Q8N668 190 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 OR2AK2Q8NG84 335 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
SMIM11A-203ENST00000399299 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 AP4M1O00189 453 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 PDCD5O14737 125 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 GPR12P47775 334 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 TMEM50BP56557 158 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 CLDN12P56749 244 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 SLC35B1P78383 322 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 STPG2Q8N412 459 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 OR56B1Q8NGI3 324 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 IL1F10Q8WWZ1 152 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 NOL4LQ96MY1 436 aaPredicted RBP11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 S1PR3Q99500 378 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 Q9H521 79 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 C12orf4Q9NQ89 552 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
SMIM11A-203ENST00000399299 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 ITGB1BP1O14713 200 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 DENRO43583 198 aaKnown RBP11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 PF4P02776 101 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 CD33P20138 364 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 MYL9P24844 172 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 SLC6A1P30531 599 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 VEGFCP49767 419 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 HLA-DRB3P79483 266 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 KHDC1LQ5JSQ8 128 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 UBE2UQ5VVX9 321 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 ARHGAP5-AS1Q96IT6 56 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 NABP2Q9BQ15 211 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 PECRQ9BY49 303 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 YTHDF1Q9BYJ9 559 aaKnown RBP11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 IFI27L2Q9H2X8 130 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 GHITMQ9H3K2 345 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 ZFP57Q9NU63 452 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 PIPOXQ9P0Z9 390 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 RAB22AQ9UL26 194 aa11.73□□□□□ -0.53
SMIM11A-203ENST00000399299 TMEM272A0A1B0GTI8 110 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 F2RL1P55085 397 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 RPL23AP62750 156 aaKnown RBP11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 HES5Q5TA89 166 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 REC114Q7Z4M0 266 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 SETD6Q8TBK2 473 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 FCGR1BQ92637 280 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 CMSS1Q9BQ75 279 aaKnown RBP11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 HDHD3Q9BSH5 251 aaPredicted RBP11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 MRPL20Q9BYC9 149 aaKnown RBP11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 SLC23A1Q9UHI7 598 aa11.72□□□□□ -0.53
SMIM11A-203ENST00000399299 SHISA3A0PJX4 238 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 LINC01548A6NM66 108 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 IFITM5A6NNB3 132 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 RAB29O14966 203 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 SOX6P35712 828 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 OR3A3P47888 321 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 MMDQ15546 238 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 TEX38Q6PEX7 206 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 SPARTQ8N0X7 666 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 EDARADDQ8WWZ3 215 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 ZNF251Q9BRH9 671 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 Q9N2K0 584 aa11.71□□□□□ -0.53
SMIM11A-203ENST00000399299 LINC00527Q9UJ94 153 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms