RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 A0A0B4J203 849 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 LCE6AA0A183 80 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 A0A1W2PP11 408 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 ODAMA1E959 279 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
CUX2-202ENST00000397643 ZNF182P17025 639 aaPredicted RBP12.63□□□□□ -0.39
CUX2-202ENST00000397643 ECI1P42126 302 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 RBM11P57052 281 aaKnown RBP12.63□□□□□ -0.39
CUX2-202ENST00000397643 SCAND1P57086 179 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 QRFPP83859 136 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 DIAPH2-AS1Q14236 149 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 OR10K2Q6IF99 312 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 TMEM104Q8NE00 496 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 ACOT12Q8WYK0 555 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 TMEM59Q9BXS4 323 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 BARHL1Q9BZE3 327 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 ETV7Q9Y603 341 aa12.63□□□□□ -0.39
CUX2-202ENST00000397643 TMEM272A0A1B0GTI8 110 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 A6NHS1 94 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 DEGS1O15121 323 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 CSN2P05814 226 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 SNRPBP14678 240 aaKnown RBP12.62□□□□□ -0.39
CUX2-202ENST00000397643 TMEM11P17152 192 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 RAB6AP20340 208 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 PRRX1P54821 245 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 RPS27AP62979 156 aaKnown RBP12.62□□□□□ -0.39
CUX2-202ENST00000397643 SLC35B1P78383 322 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 UNC119Q13432 240 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 MPV17LQ2QL34 196 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 MZT2AQ6P582 158 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 OR5M8Q8NGP6 311 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 OR9G1Q8NH87 305 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 DYNC2LI1Q8TCX1 351 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 PTX4Q96A99 478 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 RPEQ96AT9 228 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
CUX2-202ENST00000397643 CCDC59Q9P031 241 aaKnown RBP12.62□□□□□ -0.39
CUX2-202ENST00000397643 SORL1Q92673 2214 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 FAM90A10PA6NDY2 464 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 FAM90A7PA6NKC0 464 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 FAM90A23PA8MXZ1 464 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 SEC14L6B5MCN3 397 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 LDLRAD4O15165 306 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 OR7C1O76099 320 aaPredicted RBP12.61□□□□□ -0.39
CUX2-202ENST00000397643 CGB3P0DN86 165 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 CGB7P0DN87 165 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 ZNF44P15621 663 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 SCN1BQ07699 218 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 KIR2DS1Q14954 304 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 CHST4Q8NCG5 386 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 LGALS14Q8TCE9 139 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 Q96M66 194 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 SPATA2Q9UM82 520 aa12.61□□□□□ -0.39
CUX2-202ENST00000397643 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
CUX2-202ENST00000397643 FUOMA2VDF0 154 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 METTL21EPA6NDL7 271 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 ZNF729A6NN14 1252 aaPredicted RBP12.6□□□□□ -0.39
CUX2-202ENST00000397643 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
CUX2-202ENST00000397643 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
CUX2-202ENST00000397643 FHL3Q13643 280 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 HES1Q14469 280 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 Q6P435 159 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 SBSPONQ8IVN8 264 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 FOXRED2Q8IWF2 684 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 LPAR5Q9H1C0 372 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 IFT22Q9H7X7 185 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 SPACA1Q9HBV2 294 aa12.6□□□□□ -0.39
CUX2-202ENST00000397643 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 J3QR06 171 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 SLC33A1O00400 549 aaPredicted RBP12.59□□□□□ -0.39
CUX2-202ENST00000397643 IGKV1D-33P01593 117 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 IGKV1-33P01594 117 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 IGHV3-7P01780 117 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 NFYBP25208 207 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 GPR12P47775 334 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 CFHR3Q02985 330 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 HNF4GQ14541 408 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
CUX2-202ENST00000397643 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 OR56B1Q8NGI3 324 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 OR5H6Q8NGV6 325 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 NEDD4LQ96PU5 975 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 ATG5Q9H1Y0 275 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms