RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PIGYQ3MUY2 71 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 LIAT1Q6ZQX7 453 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 ZNF565Q8N9K5 539 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 Q96M66 194 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 HSPB6O14558 160 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 CA11O75493 328 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 H2AFB2P0C5Z0 115 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 TBPP20226 339 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 RCVRNP35243 200 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 RPS27AP62979 156 aaKnown RBP11.78□□□□□ -0.52
SEC13-208ENST00000397109 Q6ZSV7 163 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 LINC01006Q8NI28 216 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 ZNF596Q8TC21 504 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
SEC13-208ENST00000397109 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 CRTAPO75718 401 aaPredicted RBP11.77□□□□□ -0.52
SEC13-208ENST00000397109 MMP23AO75900 390 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 OR7C1O76099 320 aaPredicted RBP11.77□□□□□ -0.52
SEC13-208ENST00000397109 HTR1DP28221 377 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 CD34P28906 385 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 CBX5P45973 191 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 SSX2Q16385 188 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 LY6EQ16553 131 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 DPCDQ9BVM2 203 aaPredicted RBP11.77□□□□□ -0.52
SEC13-208ENST00000397109 KIF25Q9UIL4 384 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 PITPNC1Q9UKF7 332 aa11.77□□□□□ -0.52
SEC13-208ENST00000397109 NBEAL1Q6ZS30 2694 aa11.77□□□□□ -0.53
SEC13-208ENST00000397109 H3BUI4 141 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 MPIG6BO95866 241 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 CD74P04233 296 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 PAX6P26367 422 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 GLP1RP43220 463 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 DYNLT3P51808 116 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 MEF2DQ14814 521 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RBMS2Q15434 407 aaKnown RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 CDNFQ49AH0 187 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 OR10K2Q6IF99 312 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 Q6ZTK2 550 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 DYNAPQ8N1N2 210 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 SUMF2Q8NBJ7 301 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 PIFOQ8TCI5 191 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 SLC25A21Q9BQT8 299 aaPredicted RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 SELENOIQ9C0D9 397 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 KCNK15Q9H427 330 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 BANF2Q9H503 90 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 SPACA1Q9HBV2 294 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 NUDT15Q9NV35 164 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 ZNF221Q9UK13 617 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 ALG5Q9Y673 324 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 TOR1AO14656 332 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 PEX14O75381 377 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 NDUFB6O95139 128 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 MT-ND4P03905 459 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 IL5P05113 134 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 CGB3P0DN86 165 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 CGB7P0DN87 165 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 VEGFCP49767 419 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 PRRX1P54821 245 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 PROK1P58294 105 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 C17orf58Q2M2W7 97 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 STEAP1BQ6NZ63 245 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 GHITMQ9H3K2 345 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
SEC13-208ENST00000397109 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
SEC13-208ENST00000397109 A0A087X0M5 115 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 A0A0B4J293 547 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 A0A1B0GX30 115 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
SEC13-208ENST00000397109 SERPINE3A8MV23 424 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 BOLA2-SMG1P6H3BVE0 249 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 GZMHP20718 246 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 CEACAM3P40198 252 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 EIF2B2P49770 351 aaKnown RBP11.75□□□□□ -0.53
SEC13-208ENST00000397109 ARHGDIBP52566 201 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 ATAD3CQ5T2N8 411 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 C11orf88Q6PI97 169 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 BRICD5Q6PL45 260 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms