RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 GAPDHP04406 335 aaKnown RBP12.86□□□□□ -0.35
CLTA-203ENST00000396603 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
CLTA-203ENST00000396603 RAB6AP20340 208 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 UNC119Q13432 240 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 SFXN4Q6P4A7 337 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 TEX38Q6PEX7 206 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 ZNF329Q86UD4 541 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 STPG2Q8N412 459 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 OR8H1Q8NGG4 311 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 PTX4Q96A99 478 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 FUNDC2Q9BWH2 189 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
CLTA-203ENST00000396603 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 ETAA1Q9NY74 926 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 NBEAL2Q6ZNJ1 2754 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 TENM3Q9P273 2699 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 NUDT19A8MXV4 375 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 HSD17B6O14756 317 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 SCGNO76038 276 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
CLTA-203ENST00000396603 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
CLTA-203ENST00000396603 CLDN12P56749 244 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 DGCR2P98153 550 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 TMEM30BQ3MIR4 351 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 NKAPLQ5M9Q1 402 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 UTF1Q5T230 341 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 TRAT1Q6PIZ9 186 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 RNF152Q8N8N0 203 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
CLTA-203ENST00000396603 TMEM272A0A1B0GTI8 110 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 TXNL1O43396 289 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 ORC5O43913 435 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 IL3RAP26951 378 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 CHATP28329 748 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 MXD1Q05195 221 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 ARL6IP1Q15041 203 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 C6orf183Q5T699 404 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 Q8N6K4 173 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 KLHL30-AS1Q8NEE0 82 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 OR8U1Q8NH10 309 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 PLPPR1Q8TBJ4 325 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
CLTA-203ENST00000396603 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 RIMS4Q9H426 269 aaPredicted RBP12.84□□□□□ -0.35
CLTA-203ENST00000396603 TRAPPC2LQ9UL33 140 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 ETV7Q9Y603 341 aa12.84□□□□□ -0.35
CLTA-203ENST00000396603 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 LDLRAD4O15165 306 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 ELANEP08246 267 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 CD1BP29016 333 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 SSTR5P35346 364 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
CLTA-203ENST00000396603 CDX1P47902 265 aaPredicted RBP12.83□□□□□ -0.36
CLTA-203ENST00000396603 ALDH3B2P48448 385 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
CLTA-203ENST00000396603 PNLIPRP3Q17RR3 467 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 OR2T10Q8NGZ9 312 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 EAF1Q96JC9 268 aaPredicted RBP12.83□□□□□ -0.36
CLTA-203ENST00000396603 RYR3Q15413 4870 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 KIAA2026Q5HYC2 2103 aa12.83□□□□□ -0.36
CLTA-203ENST00000396603 SMIM30A4D0T7 59 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 NOL3O60936 208 aaKnown RBP12.82□□□□□ -0.36
CLTA-203ENST00000396603 MT-ND4P03905 459 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 TFAP2AP05549 437 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 GPR12P47775 334 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 VEGFCP49767 419 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 GNG10P50151 68 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 ZNF137PP52743 207 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
CLTA-203ENST00000396603 FOXE3Q13461 319 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 DIAPH2-AS1Q14236 149 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 KIR2DS1Q14954 304 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
CLTA-203ENST00000396603 SIGIRRQ6IA17 410 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 MOB1BQ7L9L4 216 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 ZNF554Q86TJ5 538 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 NICN1Q9BSH3 213 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 KCNK15Q9H427 330 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 RNF167Q9H6Y7 350 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 KCNIP1Q9NZI2 227 aa12.82□□□□□ -0.36
CLTA-203ENST00000396603 ZNF581Q9P0T4 197 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms