RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CT45A3Q8NHU0 189 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 GHITMQ9H3K2 345 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 SERPINE3A8MV23 424 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 TMEM127O75204 238 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 FBXO24O75426 580 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 CD3GP09693 182 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 CD36P16671 472 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 PPP1CCP36873 323 aaKnown RBP10.1□□□□□ -0.79
GGPS1-203ENST00000391855 REG1BP48304 166 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 ZNF134P52741 427 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 SCAND1P57086 179 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 GNMTQ14749 295 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 ABCA11PQ4W5N1 156 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 PLAC9Q5JTB6 97 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 OR10R2Q8NGX6 335 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 IL1F10Q8WWZ1 152 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 EDARADDQ8WWZ3 215 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 CHCHD6Q9BRQ6 235 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 CENPOQ9BU64 300 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 OR51E2Q9H255 320 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 Q9N2K0 584 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 PIPOXQ9P0Z9 390 aa10.1□□□□□ -0.79
GGPS1-203ENST00000391855 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
GGPS1-203ENST00000391855 RAB27BO00194 218 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 MFNGO00587 321 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 DIRAS3O95661 229 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 CSF1P09603 554 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 HIST1H1DP16402 221 aaKnown RBP10.09□□□□□ -0.79
GGPS1-203ENST00000391855 ZBTB25P24278 435 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 SERPINB10P48595 397 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 KIR2DS1Q14954 304 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-203ENST00000391855 SFXN4Q6P4A7 337 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 NR2C2APQ86WQ0 139 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 Q8N6K4 173 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 TSPAN14Q8NG11 270 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 WIPF2Q8TF74 440 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-203ENST00000391855 CYYR1Q96J86 154 aa10.09□□□□□ -0.79
GGPS1-203ENST00000391855 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-203ENST00000391855 HDHD3Q9BSH5 251 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-203ENST00000391855 MOSP00540 346 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 AMY1AP04745 511 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 AMY2AP04746 511 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 LSAMPQ13449 338 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 FBLN7Q53RD9 439 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 Q6ZPA2 131 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 Q6ZS46 218 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 S1PR3Q99500 378 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 IFI27L2Q9H2X8 130 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.08□□□□□ -0.8
GGPS1-203ENST00000391855 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
GGPS1-203ENST00000391855 SLC23A1Q9UHI7 598 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 DAPK2Q9UIK4 370 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 ETV7Q9Y603 341 aa10.08□□□□□ -0.8
GGPS1-203ENST00000391855 IGHV3-72A0A0B4J1Y9 119 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 LOC100506127A0A0U1RQW1 187 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 TRDCB7Z8K6 153 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 HSPA12AO43301 675 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SLC2A2P11168 524 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SDC2P34741 201 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 PLA2G7Q13093 441 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SRSF7Q16629 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGPS1-203ENST00000391855 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 MOGAT2Q3SYC2 334 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 C9orf152Q5JTZ5 239 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 NDUFA11Q86Y39 141 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 CROCCP3Q8IVE0 287 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 ODF3L1Q8IXM7 274 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 ATG5Q9H1Y0 275 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 A0A0B4J203 849 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SMIM30A4D0T7 59 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 RAB29O14966 203 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 FABP7O15540 132 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 KCNAB3O43448 404 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 OPN1MWP04001 364 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 FCGR3AP08637 254 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-203ENST00000391855 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 DTYMKP23919 212 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 ARFRP1Q13795 201 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 HNF4GQ14541 408 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-203ENST00000391855 FOXRED2Q8IWF2 684 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 OR4X2Q8NGF9 303 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 NABP2Q9BQ15 211 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 CABLES2Q9BTV7 478 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 TOLLIPQ9H0E2 274 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 KCNK7Q9Y2U2 307 aa10.07□□□□□ -0.8
GGPS1-203ENST00000391855 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
GGPS1-203ENST00000391855 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
GGPS1-203ENST00000391855 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
GGPS1-203ENST00000391855 TSPAN15O95858 294 aa10.06□□□□□ -0.8
GGPS1-203ENST00000391855 IGHG2P01859 326 aa10.06□□□□□ -0.8
GGPS1-203ENST00000391855 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms