RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 MED29Q9NX70 200 aa-2.44□□□□□ -2.8
TRAJ53-201ENST00000390485 MRPL27Q9P0M9 148 aaKnown RBP-2.44□□□□□ -2.8
TRAJ53-201ENST00000390485 MFHAS1Q9Y4C4 1052 aa-2.44□□□□□ -2.8
TRAJ53-201ENST00000390485 TIMM9Q9Y5J7 89 aa-2.44□□□□□ -2.8
TRAJ53-201ENST00000390485 PKD1P98161 4303 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 RAB29O14966 203 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 ATP8B1O43520 1251 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 OR1I1O60431 355 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 LSM8O95777 96 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 NPYP01303 97 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 REG1AP05451 166 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 KRT16P08779 473 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 CECR9P0C854 216 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 MDH1P40925 334 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 SSR1P43307 286 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 MAGEA2P43356 314 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 TPI1P60174 286 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 RPL37P61927 97 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 HIST1H4AP62805 103 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 SCARB2Q14108 478 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 Q499Y3 187 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 NADK2Q4G0N4 442 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 IBA57Q5T440 356 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 HES3Q5TGS1 186 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 DRAM2Q6UX65 266 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 WDR82Q6UXN9 313 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 CMTM1Q8IZ96 169 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 IQCKQ8N0W5 287 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 OR5K2Q8NHB8 316 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 PSMF1Q92530 271 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 PLEKHB2Q96CS7 222 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 THUMPD2Q9BTF0 503 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 CHST6Q9GZX3 395 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 NXF2Q9GZY0 626 aaKnown RBP-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 XPNPEP1Q9NQW7 623 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 TFR2Q9UP52 801 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 SIPA1L1O43166 1804 aa-2.45□□□□□ -2.8
TRAJ53-201ENST00000390485 OR2AT4A6NND4 320 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 F8WDY8 70 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 ZMPSTE24O75844 475 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 CRYBA1P05813 215 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 CALCBP10092 127 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 IL10P22301 178 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 ALDH3A1P30838 453 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 USF2Q15853 346 aaPredicted RBP-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 TTC32Q5I0X7 151 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 CDKL4Q5MAI5 379 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 IYDQ6PHW0 289 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 OR6K3Q8NGY3 331 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 DYNLL2Q96FJ2 89 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 TPD52L3Q96J77 140 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 RPRD1AQ96P16 312 aaPredicted RBP-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 CALN1Q9BXU9 219 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 C11orf49Q9H6J7 331 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 MID1IP1Q9NPA3 183 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 CLN6Q9NWW5 311 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 RASL12Q9NYN1 266 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 ALG5Q9Y673 324 aa-2.46□□□□□ -2.8
TRAJ53-201ENST00000390485 PPRC1Q5VV67 1664 aaKnown RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 USP47Q96K76 1375 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ABCA13Q86UQ4 5058 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 TRAV8-4A0A0B4J246 113 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 SYCE3A1L190 88 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 FUOMA2VDF0 154 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ZNF736B4DX44 427 aaPredicted RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 H7C0C1 242 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 FAAHO00519 579 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 FADS1O60427 444 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 P01737 135 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 PMP2P02689 132 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 CATP04040 527 aaKnown RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 LGALS1P09382 135 aaKnown RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 PRTN3P24158 256 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 RFC3P40938 356 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ETV6P41212 452 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ATP5OP48047 213 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 CBX1P83916 185 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 PDGFRLQ15198 375 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 CCNYL1Q8N7R7 359 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 LRRC39Q96DD0 335 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 MUCL1Q96DR8 90 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 TMA16Q96EY4 203 aaKnown RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 WDR55Q9H6Y2 383 aaPredicted RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 REEP1Q9H902 201 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 SCML1Q9UN30 329 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 TNFSF18Q9UNG2 199 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ORC6Q9Y5N6 252 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 DDX49Q9Y6V7 483 aaKnown RBP-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 PLXND1Q9Y4D7 1925 aa-2.47□□□□□ -2.8
TRAJ53-201ENST00000390485 ANK3Q12955 4377 aaKnown RBP-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 TRAV38-1A0A0B4J264 116 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 A0A0B4J2E0 115 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 TMEM250H0YL14 139 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 GPR31O00270 319 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 MAPK13O15264 365 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 ERLIN1O75477 346 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 FCN3O75636 299 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 CCNB2O95067 398 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 TTC4O95801 387 aa-2.48□□□□□ -2.81
TRAJ53-201ENST00000390485 TSPAN12O95859 305 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms