RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 C10orf107Q8IVU9 208 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ZBTB8OSQ8IWT0 167 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF557Q8N988 423 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR4P4Q8NGL7 312 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR10G4Q8NGN3 311 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR9Q1Q8NGQ5 310 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR1L8Q8NGR8 309 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR2G2Q8NGZ5 317 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR5J2Q8NH18 312 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR51Q1Q8NH59 317 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR13C6PQ8NH95 151 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ZNRF2Q8NHG8 242 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GRPEL2Q8TAA5 225 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SKA2Q8WVK7 121 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 DNAJC9Q8WXX5 260 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GHSRQ92847 366 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM203Q969S6 136 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 EEF1AKMT3Q96AZ1 226 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 BTF3L4Q96K17 158 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SORT1Q99523 831 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 VAT1Q99536 393 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GPR21Q99679 349 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 VPS25Q9BRG1 176 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TCEAL7Q9BRU2 100 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CCDC32Q9BV29 185 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ABCG5Q9H222 651 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FAM96AQ9H5X1 160 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RBM22Q9NW64 420 aaKnown RBP eCLIP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TAS2R5Q9NYW4 299 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CALYQ9NYX4 217 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 IDI2-AS1Q9NZ38 188 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 DOK5Q9P104 306 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 PSG8Q9UQ74 426 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 UTP11Q9Y3A2 253 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 LSM5Q9Y4Y9 91 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 UBIAD1Q9Y5Z9 338 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 PTPRJQ12913 1337 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SPEF2Q9C093 1822 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TNS2Q63HR2 1409 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SETD5Q9C0A6 1442 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RIMS2Q9UQ26 1411 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 MYH2Q9UKX2 1941 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 C2orf16Q68DN1 1984 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 A0A087WX48 190 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 A0A1W2PRE2 83 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MAP1LC3B2A6NCE7 125 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 C5orf58C9J3I9 102 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SLC17A3O00476 420 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 RGS5O15539 181 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CHST10O43529 356 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 MGRN1O60291 552 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 BANF1O75531 89 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ATG12O94817 140 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 IGF2P01344 180 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 PFN1P07737 140 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 IL3P08700 152 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 METTL15P1P0C7V9 234 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 PGA4P0DJD7 388 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 PGA3P0DJD8 388 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 PGA5P0DJD9 388 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SULT1A3P0DMM9 295 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SULT1A4P0DMN0 295 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 IGHV1-8P0DP01 117 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CD99P14209 185 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF25P17030 456 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 TSPOP30536 169 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CDKN2BP42772 138 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 RBP2P50120 134 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SUB1P53999 127 aaKnown RBP eCLIP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 KLF3P57682 345 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 TPI1P60174 286 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 RAB5BP61020 215 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 HSPE1P61604 102 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DYNLL1P63167 89 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 RUNX1Q01196 453 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 EMX2Q04743 252 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 BAXQ07812 192 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF616Q08AN1 781 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF816Q0VGE8 651 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 IHHQ14623 411 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CDK10Q15131 360 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 OR7A5Q15622 319 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ACOT6Q3I5F7 207 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 RNASE10Q5GAN6 216 aaKnown RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 TNFAIP8L3Q5GJ75 292 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 CLEC12AQ5QGZ9 265 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 FAM162BQ5T6X4 162 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SAMD13Q5VXD3 122 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 TEX36Q5VZQ5 186 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 KCTD16Q68DU8 428 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 OR10K2Q6IF99 312 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DCUN1D2Q6PH85 259 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 HAGHLQ6PII5 290 aaPredicted RBP1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ALKAL1Q6UXT8 129 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 C12orf54Q6X4T0 127 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 DOLPP1Q86YN1 238 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF567Q8N184 647 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 C1orf158Q8N1D5 194 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 SLC35F6Q8N357 371 aa1.3□□□□□ -2.2
TRAV40-201ENST00000390467 UBAC2Q8NBM4 344 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms