RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
VLDLR-202ENST00000382099 TXNIPQ9H3M7 391 aa12.9□□□□□ -0.34
VLDLR-202ENST00000382099 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
VLDLR-202ENST00000382099 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
VLDLR-202ENST00000382099 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
VLDLR-202ENST00000382099 C11orf94C9JXX5 98 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 NDUFB4O95168 129 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 DEFA4P12838 97 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 CCL5P13501 91 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 RAB11FIP5Q9BXF6 653 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 SLC17A3O00476 420 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 LGALS7P47929 136 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 POU3F1Q03052 451 aaPredicted RBP12.89□□□□□ -0.35
VLDLR-202ENST00000382099 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 EMC6Q9BV81 110 aa12.89□□□□□ -0.35
VLDLR-202ENST00000382099 IGKV1D-43A0A0B4J1Z2 117 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 NPIPA5E9PKD4 350 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 TIAF1O95411 115 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
VLDLR-202ENST00000382099 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 CCDC3Q9BQI4 270 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 MED29Q9NX70 200 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 NPIPA1Q9UND3 350 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 ARL2-SNX15V9GYD0 113 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 HAND1O96004 215 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 VEGFBP49765 207 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 SLC35B1P78383 322 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 ZP4Q12836 540 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 DNM1P34Q6PK57 102 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 PNKDQ8N490 385 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 ZNF439Q8NDP4 499 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 RERGQ96A58 199 aaPredicted RBP12.88□□□□□ -0.35
VLDLR-202ENST00000382099 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 TRAV8-6A0A0B4J262 113 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 SERPINE2P07093 398 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 PSG4Q00888 419 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 TMEM144Q7Z5S9 345 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 BATF2Q8N1L9 274 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 OR4S2Q8NH73 311 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 SFRP2Q96HF1 295 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 RCHY1Q96PM5 261 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 C11orf1Q9H5F2 150 aa12.88□□□□□ -0.35
VLDLR-202ENST00000382099 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
VLDLR-202ENST00000382099 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 SPANXN5Q5MJ07 72 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 MUC15Q8N387 334 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 FAM89BQ8N5H3 189 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 ZIC4Q8N9L1 334 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 ZNF114Q8NC26 417 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
VLDLR-202ENST00000382099 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 IGKV1-9A0A0C4DH69 117 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 NAPSAO96009 420 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 PVRP15151 417 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 IGLL1P15814 213 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
VLDLR-202ENST00000382099 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
VLDLR-202ENST00000382099 PPOXP50336 477 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 GABRA6Q16445 453 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 PLCXD3Q63HM9 321 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 OR1K1Q8NGR3 316 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
VLDLR-202ENST00000382099 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
VLDLR-202ENST00000382099 TRAV36DV7A0A075B6V5 113 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 SLC31A1O15431 190 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 S1PR2O95136 353 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 CXCL10P02778 98 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
VLDLR-202ENST00000382099 RPS20P60866 119 aaKnown RBP12.86□□□□□ -0.35
VLDLR-202ENST00000382099 YPEL3P61236 119 aaPredicted RBP12.86□□□□□ -0.35
VLDLR-202ENST00000382099 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
VLDLR-202ENST00000382099 FAM71F2Q6NXP2 309 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 OR10G8Q8NGN5 311 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 NAA38Q9BRA0 125 aaKnown RBP12.86□□□□□ -0.35
VLDLR-202ENST00000382099 NUDT22Q9BRQ3 303 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 TAAR3PQ9P1P4 343 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 DMDP11532 3685 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 H0YIG0 161 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 VENTXO95231 258 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 IGKV1D-33P01593 117 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 IGKV1-33P01594 117 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 PGCP20142 388 aa12.86□□□□□ -0.35
VLDLR-202ENST00000382099 FOXL1Q12952 345 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms