RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 NXF2Q9GZY0 626 aaKnown RBP9.65□□□□□ -0.86
PCNA-201ENST00000379143 GHITMQ9H3K2 345 aa9.65□□□□□ -0.86
PCNA-201ENST00000379143 RABL2AQ9UBK7 228 aaPredicted RBP9.65□□□□□ -0.86
PCNA-201ENST00000379143 EXTL2Q9UBQ6 330 aa9.65□□□□□ -0.86
PCNA-201ENST00000379143 SLC23A1Q9UHI7 598 aa9.65□□□□□ -0.86
PCNA-201ENST00000379143 RABL2BQ9UNT1 228 aa9.65□□□□□ -0.86
PCNA-201ENST00000379143 MRPS7Q9Y2R9 242 aaKnown RBP9.65□□□□□ -0.86
PCNA-201ENST00000379143 A3GALT2U3KPV4 340 aa9.65□□□□□ -0.86
PCNA-201ENST00000379143 DNAJC9-AS1A6NH13 148 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 LY6LH3BQJ8 138 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 SULT1C2O00338 296 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 CTDSP2O14595 271 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 ITGB1BP1O14713 200 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 HLA-DQB1P01920 261 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 GSTT2P0CG29 244 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 GSTT2BP0CG30 244 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 PPP1CCP36873 323 aaKnown RBP9.64□□□□□ -0.87
PCNA-201ENST00000379143 CEACAM6P40199 344 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 RAB7AP51149 207 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 DYNLT3P51808 116 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 GNMTQ14749 295 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 LRRC75BQ2VPJ9 315 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 CT45A1Q5HYN5 189 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 UTF1Q5T230 341 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 HOGA1Q86XE5 327 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 LAX1Q8IWV1 398 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 CT45A3Q8NHU0 189 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 FAM216AQ8WUB2 273 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 TOMM40LQ969M1 308 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 RPEQ96AT9 228 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 SSX3Q99909 188 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 MMP27Q9H306 513 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 SCPEP1Q9HB40 452 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 IFT46Q9NQC8 304 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 ABCB10Q9NRK6 738 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 ANXA10Q9UJ72 324 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
PCNA-201ENST00000379143 TRBV6-7A0A0A0MS04 114 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 BET1O15155 118 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 TXNL1O43396 289 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 VENTXO95231 258 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 BRS3P32247 399 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 ZNF134P52741 427 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 ZNF137PP52743 207 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 ARPC4P59998 168 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 SLC9A3R2Q15599 337 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 TPTE2P1Q5T6R2 138 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 CNIH2Q6PI25 160 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 C5orf24Q7Z6I8 188 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 OR8H3Q8N146 312 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 ZDHHC22Q8N966 263 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 DTX3Q8N9I9 347 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 BEST4Q8NFU0 473 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 MAFIPQ8WZ33 124 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 GINS4Q9BRT9 223 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 TOLLIPQ9H0E2 274 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 BATF3Q9NR55 127 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 PIPOXQ9P0Z9 390 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 OR1A1Q9P1Q5 309 aa9.63□□□□□ -0.87
PCNA-201ENST00000379143 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 A0A1W2PPE3 182 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 H3BUX3 64 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 HSD17B6O14756 317 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 PTHLHP12272 177 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 S100A5P33763 92 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 UBA52P62987 128 aaKnown RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 MRPS10P82664 201 aaKnown RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 ZNF816Q0VGE8 651 aaPredicted RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 HERPUD1Q15011 391 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 FAM53AQ6NSI3 398 aaPredicted RBP9.62□□□□□ -0.87
PCNA-201ENST00000379143 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 SNX29P2Q8IUI4 249 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 LYG1Q8N1E2 194 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 DYNAPQ8N1N2 210 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 RDH8Q9NYR8 311 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 PITPNC1Q9UKF7 332 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 VPREB3Q9UKI3 123 aa9.62□□□□□ -0.87
PCNA-201ENST00000379143 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 RAB29O14966 203 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 SLC31A2O15432 143 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 PYHIN1Q6K0P9 492 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 FAM71F2Q6NXP2 309 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 C16orf87Q6PH81 154 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 TGIF2LXQ8IUE1 241 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 OR5AP2Q8NGF4 316 aa9.61□□□□□ -0.87
PCNA-201ENST00000379143 GPX8Q8TED1 209 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms