RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PPP1CCP36873 323 aaKnown RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 ASCL1P50553 236 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 TMPRSS3P57727 454 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 DOLPP1Q86YN1 238 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 NEK7Q8TDX7 302 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 SSC4DQ8WTU2 575 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 RTN4IP1Q8WWV3 396 aaPredicted RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 APOBEC3DQ96AK3 386 aaPredicted RBP9.07□□□□□ -0.96
TPM3-212ENST00000368533 MUCL1Q96DR8 90 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 HIST1H2BLQ99880 126 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 NECAP2Q9NVZ3 263 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 FBXL17Q9UF56 701 aa9.07□□□□□ -0.96
TPM3-212ENST00000368533 TRBV6-7A0A0A0MS04 114 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 SMCO3A2RU48 225 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 CD300LBA8K4G0 201 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 TAGLN2P37802 199 aaKnown RBP9.06□□□□□ -0.96
TPM3-212ENST00000368533 TBC1D28Q2M2D7 210 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 C1orf185Q5T7R7 199 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 THNSL2Q86YJ6 484 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 PRR18Q8N4B5 295 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 ZNF611Q8N823 705 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 SLC25A40Q8TBP6 338 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
TPM3-212ENST00000368533 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 TM2D1Q9BX74 207 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 ZNF816-ZNF321PA0A0X1KG74 233 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 M0R1B8 84 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 IFNA10P01566 189 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 OR5AC1P0C628 307 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 PGA5P0DJD9 388 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 RPS2P15880 293 aaKnown RBP9.06□□□□□ -0.96
TPM3-212ENST00000368533 MPV17P39210 176 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 ELOBQ15370 118 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 SPIN3Q5JUX0 258 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 WDR31Q8NA23 367 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 HPSE2Q8WWQ2 592 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 AQP10Q96PS8 301 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 NDUFAF3Q9BU61 184 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 SH3BGRL3Q9H299 93 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 PARP11Q9NR21 331 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
TPM3-212ENST00000368533 CEACAM18A8MTB9 384 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 SLC33A1O00400 549 aaPredicted RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 SYNGR1O43759 233 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 TFF1P04155 84 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 CECR9P0C854 216 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 GZMBP10144 247 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 ALDH3B1P43353 468 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 TMEM33P57088 247 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 HERV-K104P61576 105 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 HAGHQ16775 308 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 KRTAP27-1Q3LI81 207 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 SOHLH1Q5JUK2 328 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 C1QL4Q86Z23 238 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 OSR2Q8N2R0 312 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 WFIKKN1Q96NZ8 548 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 TMEM208Q9BTX3 173 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 MSL2Q9HCI7 577 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 DUSP13Q9UII6 198 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 TRGV8A0A0C4DH27 118 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 PRRG2O14669 202 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 MBPP02686 304 aaPredicted RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 CTSDP07339 412 aaPredicted RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 HKR1P10072 659 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 CAMLGP49069 296 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 GUSBP1Q15486 140 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 LYZL2Q7Z4W2 148 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 OR11L1Q8NGX0 322 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 ERGIC1Q969X5 290 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 LIME1Q9H400 295 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 HSF4Q9ULV5 492 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 DCHS2Q6V1P9 2916 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 PHF1O43189 567 aaPredicted RBP9.05□□□□□ -0.96
TPM3-212ENST00000368533 RHBDL1O75783 438 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 GRPP07492 148 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 BCL3P20749 454 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 PPP1CBP62140 327 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 CCL20P78556 96 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 OR8B8Q15620 311 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 HSD17B11Q8NBQ5 300 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 RAB39BQ96DA2 213 aa9.05□□□□□ -0.96
TPM3-212ENST00000368533 A0A0G2JNJ9 132 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
TPM3-212ENST00000368533 SMPD2O60906 423 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 RAB4BP61018 213 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 PPA1Q15181 289 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 RHEBQ15382 184 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 NCR3LG1Q68D85 454 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 COLCA1Q6ZS62 124 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 LHFPL2Q6ZUX7 228 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 FAM57AQ8TBR7 257 aa9.04□□□□□ -0.96
TPM3-212ENST00000368533 ZNF286AQ9HBT8 521 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms