RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 SIT1Q9Y3P8 196 aa12.31□□□□□ -0.44
GFRA1-201ENST00000355422 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 UBE2L5PA0A1B0GUS4 154 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 CA6P23280 308 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 LHX2P50458 406 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 GNG3P63215 75 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 RPP25LQ8N5L8 163 aaKnown RBP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 NECAP1Q8NC96 275 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 LHX4Q969G2 390 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 TNRC6AQ8NDV7 1962 aaKnown RBP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 SIRPB1O00241 398 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 IFNA1P01562 189 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 IGHEP01854 428 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 WNT2P09544 360 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 CD81P60033 236 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 Q6P435 159 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 C16orf82Q7Z2V1 217 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 OR10A7Q8NGE5 316 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
GFRA1-201ENST00000355422 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
GFRA1-201ENST00000355422 DMDP11532 3685 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 A0A1W2PR80 420 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 IL2RGP31785 369 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 WNT5AP41221 380 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 CLDN18P56856 261 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 SLC38A11Q08AI6 406 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 ACSF3Q4G176 576 aaPredicted RBP12.29□□□□□ -0.44
GFRA1-201ENST00000355422 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
GFRA1-201ENST00000355422 TMEM9BQ9NQ34 198 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 PITPNC1Q9UKF7 332 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 LRP5LA4QPB2 252 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 NPIPB11E5RHQ5 1161 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 PLP2Q04941 152 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 PRSS50Q9UI38 385 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 BOKQ9UMX3 212 aaPredicted RBP12.29□□□□□ -0.44
GFRA1-201ENST00000355422 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 MPC1Q9Y5U8 109 aa12.29□□□□□ -0.44
GFRA1-201ENST00000355422 OR5B21A6NL26 309 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 ARR3P36575 388 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 PKIAP61925 76 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 SPATA46Q5T0L3 261 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
GFRA1-201ENST00000355422 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
GFRA1-201ENST00000355422 UFSP2Q9NUQ7 469 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 FRYLO94915 3013 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 SYNGR4O95473 234 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 CLDN1O95832 211 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 SERPINA7P05543 415 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 PFN1P07737 140 aaKnown RBP12.28□□□□□ -0.44
GFRA1-201ENST00000355422 TUBG1P23258 451 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
GFRA1-201ENST00000355422 DNLZQ5SXM8 178 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 APH1AQ96BI3 265 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
GFRA1-201ENST00000355422 FAM166BA8MTA8 275 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 OR2H2O95918 312 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 DDTP30046 118 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 CEACAM6P40199 344 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 ERVS71-1P61550 626 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 COL10A1Q03692 680 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 CLEC12BQ2HXU8 276 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 ACSM6Q6P461 480 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 TIPARPQ7Z3E1 657 aaKnown RBP12.27□□□□□ -0.44
GFRA1-201ENST00000355422 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.44
GFRA1-201ENST00000355422 TMEM183AQ8IXX5 376 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 DRAM1Q8N682 238 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 OR2M7Q8NG81 312 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 CT55Q8WUE5 264 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.44
GFRA1-201ENST00000355422 MEGF10Q96KG7 1140 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 PKIBQ9C010 78 aa12.27□□□□□ -0.44
GFRA1-201ENST00000355422 ZNF703Q9H7S9 590 aaPredicted RBP12.27□□□□□ -0.44
GFRA1-201ENST00000355422 GZMHP20718 246 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 APLNRP35414 380 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 BSXQ3C1V8 233 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 MAFAQ8NHW3 353 aaPredicted RBP12.27□□□□□ -0.45
GFRA1-201ENST00000355422 GATAD1Q8WUU5 269 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 GPR87Q9BY21 358 aa12.27□□□□□ -0.45
GFRA1-201ENST00000355422 PARD6GQ9BYG4 376 aaPredicted RBP12.27□□□□□ -0.45
GFRA1-201ENST00000355422 STRADBQ9C0K7 418 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms