RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 CASTOR1Q8WTX7 329 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 GFOD1Q9NXC2 390 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 PAX1P15863 534 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 RND3P61587 244 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 GNB2P62879 340 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 MITD1Q8WV92 249 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 PHB2Q99623 299 aa12.85□□□□□ -0.35
CTSA-202ENST00000354880 MMP23AO75900 390 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 SULT1A3P0DMM9 295 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 SULT1A4P0DMN0 295 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 NFYBP25208 207 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 CD34P28906 385 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 ESCO2Q56NI9 601 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 C11orf88Q6PI97 169 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 BVESQ8NE79 360 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 FAM216AQ8WUB2 273 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 FAM168AQ92567 244 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 PERPQ96FX8 193 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 AKR1E2Q96JD6 320 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
CTSA-202ENST00000354880 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 RPUSD1Q9UJJ7 312 aaKnown RBP12.84□□□□□ -0.35
CTSA-202ENST00000354880 KCNS2Q9ULS6 477 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 ABCA12Q86UK0 2595 aa12.84□□□□□ -0.35
CTSA-202ENST00000354880 NDUFS8O00217 210 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 MPPED1O15442 326 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.35
CTSA-202ENST00000354880 IFNA2P01563 188 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 IGLV2-14P01704 120 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 IGHV2-5P01817 119 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 CXCL3P19876 107 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 S100GP29377 79 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 KRTAP10-9P60411 292 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 CD83Q01151 205 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 CD300CQ08708 224 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 CLEC2AQ6UVW9 174 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 ZNF645Q8N7E2 425 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 C8orf46Q8TAG6 207 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 GALNT14Q96FL9 552 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 AGMATQ9BSE5 352 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 GSX2Q9BZM3 304 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 OR2D2Q9H210 308 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 RNF150Q9ULK6 438 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 PSG11Q9UQ72 335 aa12.83□□□□□ -0.35
CTSA-202ENST00000354880 ANKRD17O75179 2603 aaKnown RBP12.83□□□□□ -0.35
CTSA-202ENST00000354880 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
CTSA-202ENST00000354880 PPIAL4CA0A0B4J2A2 164 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 A0A1W2PPH5 198 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 A8MV72 311 aaPredicted RBP12.83□□□□□ -0.36
CTSA-202ENST00000354880 ST8SIA5O15466 376 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 POLQO75417 2590 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 IGHV3-7P01780 117 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 PPIAL4GP0DN37 164 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 ANXA3P12429 323 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 APCP25054 2843 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 DLX6P56179 175 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 ERVFRD-1P60508 538 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 TBC1D26Q86UD7 250 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 ST6GAL2Q96JF0 529 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 MGAT4CQ9UBM8 478 aa12.83□□□□□ -0.36
CTSA-202ENST00000354880 ITGB1BP1O14713 200 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 TNFSF12O43508 249 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 PGLYRP1O75594 196 aaPredicted RBP12.82□□□□□ -0.36
CTSA-202ENST00000354880 SLC22A5O76082 557 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 ZNF134P52741 427 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 LY6G6FQ5SQ64 297 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 DRAM1Q8N682 238 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 LY6G5BQ8NDX9 201 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 COQ8AQ8NI60 647 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 RAB39BQ96DA2 213 aa12.82□□□□□ -0.36
CTSA-202ENST00000354880 C22orf46C9J442 243 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 OR5AC1P0C628 307 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 MSMO1Q15800 293 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 UTF1Q5T230 341 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 KCTD9Q7L273 389 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 CLDND2Q8NHS1 167 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 GPHA2Q96T91 129 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ABHD14AQ9BUJ0 271 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 RANGRFQ9HD47 186 aaPredicted RBP12.81□□□□□ -0.36
CTSA-202ENST00000354880 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms