RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SLC25A31Q9H0C2 315 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 LHX5Q9H2C1 402 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 MS4A6AQ9H2W1 248 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 DSN1Q9H410 356 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 METTL8Q9H825 291 aaKnown RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF331Q9NQX6 463 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 TAS2R5Q9NYW4 299 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 DNAJC12Q9UKB3 198 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SLC22A7Q9Y694 548 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 DMXL2Q8TDJ6 3036 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM31A0A1B0GVY4 71 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM213A2RRL7 107 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 EFCAB9A8MZ26 197 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SULT1B1O43704 296 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CCNKO75909 580 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 PSG2P11465 335 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 ACTR1BP42025 376 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 STC1P52823 247 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 PSME3P61289 254 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SMCO1Q147U7 214 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 BCL2A1Q16548 175 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SLC25A30Q5SVS4 291 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 METTL7BQ6UX53 244 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 IZUMO2Q6UXV1 221 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF584Q8IVC4 421 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 C12orf56Q8IXR9 622 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR2M7Q8NG81 312 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR4K5Q8NGD3 323 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 FAM104AQ969W3 186 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 HSD17B10Q99714 261 aaKnown RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF649Q9BS31 505 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 UBXN6Q9BZV1 441 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 RSL24D1Q9UHA3 163 aaKnown RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 FAM32AQ9Y421 112 aaKnown RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 POLR3HQ9Y535 204 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 PRSS21Q9Y6M0 314 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 COL7A1Q02388 2944 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 TOP2AP11388 1531 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ANKHD1Q8IWZ3 2542 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 UBR3Q6ZT12 1888 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 A0A087WXM4 84 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV5-51A0A0C4DH38 117 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 IGKV1-6A0A0C4DH72 117 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 EFCAB10A6NFE3 127 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 KPNA3O00505 521 aaPredicted RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 GATCO43716 136 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 REM1O75628 298 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CRTAPO75718 401 aaPredicted RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 FAM228BP0C875 321 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 HOXA9P31269 272 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RPL5P46777 297 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 GCLMP48507 274 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 GDI2P50395 445 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 DLX6P56179 175 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 IMPG1Q17R60 797 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 AVPI1Q5T686 147 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 FBXL22Q6P050 247 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 DGAT2L6Q6ZPD8 337 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 NTM-AS1Q6ZSK4 140 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SSX7Q7RTT5 188 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 DOLPP1Q86YN1 238 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ZFP82Q8N141 532 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ABHD3Q8WU67 409 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 S100ZQ8WXG8 99 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 BORCS5Q969J3 196 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 TMA16Q96EY4 203 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RMND5BQ96G75 393 aaPredicted RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MARVELD1Q9BSK0 173 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MND1Q9BWT6 205 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 COMMD9Q9P000 198 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RAB26Q9ULW5 256 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 HES2Q9Y543 173 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RTL9Q8NET4 1388 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 DOCK9Q9BZ29 2069 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV5-10-1A0A0J9YXX1 117 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 K7EM74 188 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 KCNK1O00180 336 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CCRL2O00421 344 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MANBAO00462 879 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PSPHP1O15172 72 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SSNA1O43805 119 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 LY6G6DO95868 133 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PTHP01270 115 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 IFNA5P01569 189 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ELK1P19419 428 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PSMB9P28065 219 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 APLNRP35414 380 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 TGFBR2P37173 567 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PMELP40967 661 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 UBE2AP49459 152 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 NAA20P61599 178 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF846Q147U1 533 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 NEDD8Q15843 81 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 HLA-DRB5Q30154 266 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CHRFAM7AQ494W8 412 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 COX19Q49B96 90 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CCDC58Q4VC31 144 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CLVS2Q5SYC1 327 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 LCE3CQ5T5A8 94 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms