RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MRGPRGQ86SM5 289 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 OR51B6Q9H340 312 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 VAX2Q9UIW0 290 aa20.75■□□□□ 0.91
CPNE1-202ENST00000352393 PPP1R2P9O14990 202 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 TGOLN2O43493 480 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 CDPF1Q6NVV7 123 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 ABHD5Q8WTS1 349 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 FRZBQ92765 325 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 KCNS2Q9ULS6 477 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 PHOX2AO14813 284 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 TRGC1P0CF51 173 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 ACP1P24666 158 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 ABHD17BQ5VST6 288 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 GFI1BQ5VTD9 330 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 WDR86Q86TI4 376 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 LINC00469Q8N7U9 141 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 PINX1Q96BK5 328 aaKnown RBP20.74■□□□□ 0.91
CPNE1-202ENST00000352393 OR4C12Q96R67 309 aa20.74■□□□□ 0.91
CPNE1-202ENST00000352393 MAP1LC3B2A6NCE7 125 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 SIRPB1O00241 398 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 OR2H2O95918 312 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 CLN3Q13286 438 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 PMS2P11Q13670 270 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 PRR18Q8N4B5 295 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 TMEM251Q8N6I4 163 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 OR10D4PQ8NGN7 298 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 MAP1LC3BQ9GZQ8 125 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 GP6Q9HCN6 339 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 PRSS50Q9UI38 385 aa20.73■□□□□ 0.91
CPNE1-202ENST00000352393 TRBV24-1A0A075B6N3 115 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 GATCO43716 136 aaKnown RBP20.72■□□□□ 0.91
CPNE1-202ENST00000352393 MT-CO3P00414 261 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 ZNF16P17020 682 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-202ENST00000352393 OR1C1Q15619 314 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 OR1K1Q8NGR3 316 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 SSX3Q99909 188 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 GPR61Q9BZJ8 451 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 CEBPZOSA8MTT3 80 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 FAM90A26D6RGX4 464 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 IL18BPO95998 194 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 IFNA1P01562 189 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 ERVK11-1P61568 191 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 DRAM1Q8N682 238 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 ZNF383Q8NA42 475 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 TAF15Q92804 592 aaKnown RBP eCLIP20.72■□□□□ 0.911e-6■□□□□ 9.7
CPNE1-202ENST00000352393 ZPBPQ9BS86 351 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 SPRY4Q9C004 299 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 MBNL3Q9NUK0 354 aaKnown RBP20.72■□□□□ 0.91
CPNE1-202ENST00000352393 TRAPPC2LQ9UL33 140 aa20.72■□□□□ 0.91
CPNE1-202ENST00000352393 JMJD7P0C870 316 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 SLC38A11Q08AI6 406 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 C3AR1Q16581 482 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 SPANXN5Q5MJ07 72 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 SPATA46Q5T0L3 261 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 WDR25Q64LD2 544 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-202ENST00000352393 TMEM105Q8N8V8 129 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 UBALD1Q8TB05 177 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 RTL8AQ9BWD3 113 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 RBKSQ9H477 322 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 RBM7Q9Y580 266 aaKnown RBP20.71■□□□□ 0.91
CPNE1-202ENST00000352393 WDR1O75083 606 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 PTBP3O95758 552 aaKnown RBP20.71■□□□□ 0.91
CPNE1-202ENST00000352393 OPN1MWP04001 364 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 RD3LP0DJH9 198 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 OPN1MW2P0DN77 364 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 OPN1MW3P0DN78 364 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 ELLP55199 621 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-202ENST00000352393 TMEM14EPQ6UXP3 125 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 CTDSP1Q9GZU7 261 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 TIMM9Q9Y5J7 89 aa20.71■□□□□ 0.91
CPNE1-202ENST00000352393 UBE2L5PA0A1B0GUS4 154 aa20.7■□□□□ 0.9
CPNE1-202ENST00000352393 PDGFBP01127 241 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-202ENST00000352393 Q8IYB0 196 aa20.7■□□□□ 0.9
CPNE1-202ENST00000352393 AGMATQ9BSE5 352 aa20.7■□□□□ 0.9
CPNE1-202ENST00000352393 WIPI2Q9Y4P8 454 aa20.7■□□□□ 0.9
CPNE1-202ENST00000352393 FRYLO94915 3013 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 MDP1Q86V88 176 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 MCEMP1Q8IX19 187 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 BCL2L2Q92843 193 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-202ENST00000352393 VPS13AQ96RL7 3174 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 IGKV1D-33P01593 117 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 IGKV1-33P01594 117 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 C9orf152Q5JTZ5 239 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 DNLZQ5SXM8 178 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 SCCPDHQ8NBX0 429 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 PRDM13Q9H4Q3 707 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 FREM2Q5SZK8 3169 aa20.69■□□□□ 0.9
CPNE1-202ENST00000352393 DNAJC13O75165 2243 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 C19orf67A6NJJ6 358 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 OR5H1A6NKK0 313 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 RNF212BA8MTL3 300 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 PDZD11Q5EBL8 140 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 CENPVQ7Z7K6 275 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-202ENST00000352393 FGFRL1Q8N441 504 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 DDA1Q9BW61 102 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 CDH20Q9HBT6 801 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 ABI3Q9P2A4 366 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 POLDIP2Q9Y2S7 368 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 R4GN57 208 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 ZNF737O75373 536 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms