RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PTX4Q96A99 478 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 PHF21AQ96BD5 680 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 S1PR3Q99500 378 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 GHITMQ9H3K2 345 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 A0A0A6YYD4 124 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 SLC31A2O15432 143 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 LANCL1O43813 399 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 OPN1MWP04001 364 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 CD36P16671 472 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 HLA-DRB3P79483 266 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 TET2Q6N021 2002 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 OR10R2Q8NGX6 335 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 ST6GALNAC6Q969X2 333 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 CHCHD6Q9BRQ6 235 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 ATG5Q9H1Y0 275 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 PIPOXQ9P0Z9 390 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 SLC23A1Q9UHI7 598 aa12.58□□□□□ -0.4
TSPAN4-201ENST00000346501 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 LDLRAD4O15165 306 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 ZNF134P52741 427 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 TMEM50BP56557 158 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 ARFRP1Q13795 201 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 EBI3Q14213 229 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 GNMTQ14749 295 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 ZNF880Q6PDB4 577 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 NDUFA11Q86Y39 141 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 FOXRED2Q8IWF2 684 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 OR5AU1Q8NGC0 362 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 FAM110DQ8TAY7 271 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 WNT10AQ9GZT5 417 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 Q9N2K0 584 aa12.57□□□□□ -0.4
TSPAN4-201ENST00000346501 A0A075B6Q4 140 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 RAB29O14966 203 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 SERPINB10P48595 397 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 SLC35B1P78383 322 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 C5orf56Q8N8D9 126 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 TSPAN14Q8NG11 270 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 OR4F17Q8NGA8 305 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 OR4F4Q96R69 305 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 HDHD3Q9BSH5 251 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 GON7Q9BXV9 100 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 OR51E2Q9H255 320 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 DAPK2Q9UIK4 370 aa12.56□□□□□ -0.4
TSPAN4-201ENST00000346501 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 SMIM30A4D0T7 59 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 FOXI3A8MTJ6 420 aaPredicted RBP12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 KCNAB3O43448 404 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 CEACAM6P40199 344 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 TMEM95Q3KNT9 176 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 PLAC9Q5JTB6 97 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 Q6ZS46 218 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 LIN7CQ9NUP9 197 aaKnown RBP12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 ZNF221Q9UK13 617 aa12.55□□□□□ -0.4
TSPAN4-201ENST00000346501 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 TMEM127O75204 238 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 TSPAN15O95858 294 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 CD28P10747 220 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 SLC2A2P11168 524 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 GNB3P16520 340 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 SDC2P34741 201 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 SCAND1P57086 179 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 MXD1Q05195 221 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 LSAMPQ13449 338 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 KHDC1LQ5JSQ8 128 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 SFXN4Q6P4A7 337 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 OR4A4PQ8NGN8 299 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 ZNF251Q9BRH9 671 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
TSPAN4-201ENST00000346501 SAA2-SAA4A0A096LPE2 208 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 SH2D7A6NKC9 451 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 RAB27BO00194 218 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 FABP7O15540 132 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 AMY1AP04745 511 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 AMY2AP04746 511 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 SCTP09683 121 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 MC5RP33032 325 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 PITPNAQ00169 270 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 MMDQ15546 238 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
TSPAN4-201ENST00000346501 R3HDM4Q96D70 268 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms