RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 C3AR1Q16581 482 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 SCCPDHQ8NBX0 429 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 MDS2Q8NDY4 140 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 VSIRQ9H7M9 311 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 C3orf80F5H4A9 247 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 SIRPB1O00241 398 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 TGOLN2O43493 480 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 CYB5R3P00387 301 aaPredicted RBP19.04■□□□□ 0.64
HOXD1-201ENST00000331462 SP1P08047 785 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 SPINK2P20155 84 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 MEOX1P50221 254 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 TBC1D28Q2M2D7 210 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 MRGPRGQ86SM5 289 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 LURAP1LQ8IV03 231 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 DRAM1Q8N682 238 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 GGACTQ9BVM4 153 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 TIMM9Q9Y5J7 89 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 YIF1AO95070 293 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 TMEM14EPQ6UXP3 125 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 LINC00696Q6ZRV3 163 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 SSX7Q7RTT5 188 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 LILRB2Q8N423 598 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 OR51B6Q9H340 312 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 VAX2Q9UIW0 290 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 KCNS2Q9ULS6 477 aa19.04■□□□□ 0.64
HOXD1-201ENST00000331462 TRAV39A0A0B4J263 110 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 A0A1W2PNU3 283 aaPredicted RBP19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BKO60814 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BJP06899 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BOP23527 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BBP33778 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BDP58876 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BCP62807 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST2H2BEQ16778 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.03■□□□□ 0.64
HOXD1-201ENST00000331462 LCN15Q6UWW0 184 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 CENPVQ7Z7K6 275 aaPredicted RBP19.03■□□□□ 0.64
HOXD1-201ENST00000331462 ZBTB34Q8NCN2 500 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BHQ93079 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BNQ99877 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 HIST1H2BMQ99879 126 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 URGCP-MRPS24S4R325 110 aa19.03■□□□□ 0.64
HOXD1-201ENST00000331462 ZFP92A6NM28 416 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 SMPD2O60906 423 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 SPATA46Q5T0L3 261 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 C1orf87Q8N0U7 546 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 OR4C12Q96R67 309 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 C12orf49Q9H741 205 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 SDF2L1Q9HCN8 221 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 RBM7Q9Y580 266 aaKnown RBP19.02■□□□□ 0.64
HOXD1-201ENST00000331462 SEC14L6B5MCN3 397 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 KLRC4-KLRK1H3BQV0 150 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 CLDN34H7C241 214 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 IFNA1P01562 189 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 P0C879 139 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 GABRA6Q16445 453 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 EDARADDQ8WWZ3 215 aa19.02■□□□□ 0.64
HOXD1-201ENST00000331462 TAF15Q92804 592 aaKnown RBP eCLIP19.02■□□□□ 0.64
HOXD1-201ENST00000331462 SH2D1BO14796 132 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 CYB5BO43169 146 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 WDR1O75083 606 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 CEACAM6P40199 344 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 NDUFA6P56556 154 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 IGFBP7Q16270 282 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 AGMATQ9BSE5 352 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 HSPB7Q9UBY9 170 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 ESPL1Q14674 2120 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 ELOA3CA0A087WX78 387 aaPredicted RBP19.01■□□□□ 0.63
HOXD1-201ENST00000331462 MAP1LC3B2A6NCE7 125 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 NDUFS6O75380 124 aaKnown RBP19.01■□□□□ 0.63
HOXD1-201ENST00000331462 PPP1CBP62140 327 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 SLC38A11Q08AI6 406 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 SLC10A1Q14973 349 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 FGFRL1Q8N441 504 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 PRR18Q8N4B5 295 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 WDYHV1Q96HA8 205 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 MAP1LC3BQ9GZQ8 125 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 CTDSP1Q9GZU7 261 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 GAR1Q9NY12 217 aaKnown RBP19.01■□□□□ 0.63
HOXD1-201ENST00000331462 DMRT1Q9Y5R6 373 aa19.01■□□□□ 0.63
HOXD1-201ENST00000331462 TRBV24-1A0A075B6N3 115 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 ATXN7O15265 892 aaPredicted RBP19■□□□□ 0.63
HOXD1-201ENST00000331462 ZNF16P17020 682 aaPredicted RBP19■□□□□ 0.63
HOXD1-201ENST00000331462 TNFRSF9Q07011 255 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 MRPL49Q13405 166 aaKnown RBP19■□□□□ 0.63
HOXD1-201ENST00000331462 EIF4EBP1Q13541 118 aaPredicted RBP19■□□□□ 0.63
HOXD1-201ENST00000331462 MSMO1Q15800 293 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 ZNF766Q5HY98 468 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 SPANXN5Q5MJ07 72 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 TMEM164Q5U3C3 297 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 ZNF645Q8N7E2 425 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 FAM210BQ96KR6 192 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 HES4Q9HCC6 221 aa19■□□□□ 0.63
HOXD1-201ENST00000331462 TMEM210A6NLX4 147 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 C1QTNF9BB2RNN3 333 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 NXPH2O95156 264 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 RAC2P15153 192 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 S100A2P29034 98 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 IQCF6A8MYZ5 107 aa18.99■□□□□ 0.63
HOXD1-201ENST00000331462 TRGC2P03986 189 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms