RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 SLC45A2Q9UMX9 530 aa20.78■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1D-33P01593 117 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1-33P01594 117 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 BLKP51451 505 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 SNAI3Q3KNW1 292 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 OR4C12Q96R67 309 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1D-13A0A0B4J2D9 117 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 GRIFINA4D1Z8 144 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 OR5G3P0C626 314 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 IGKV1-13P0DP09 117 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 ARL4DP49703 201 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 RBM11P57052 281 aaKnown RBP20.77■□□□□ 0.92
SOX1-201ENST00000330949 PDCD1Q15116 288 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 MSMO1Q15800 293 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 RIPPLY2Q5TAB7 128 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 ZDHHC11Q9H8X9 412 aa20.77■□□□□ 0.92
SOX1-201ENST00000330949 OR7C1O76099 320 aaPredicted RBP20.77■□□□□ 0.91
SOX1-201ENST00000330949 F2RP25116 425 aa20.77■□□□□ 0.91
SOX1-201ENST00000330949 SHBQ15464 509 aa20.77■□□□□ 0.91
SOX1-201ENST00000330949 HAPLN4Q86UW8 402 aa20.77■□□□□ 0.91
SOX1-201ENST00000330949 SLC25A22Q9H936 323 aa20.77■□□□□ 0.91
SOX1-201ENST00000330949 NDUFB8O95169 186 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 SERPINE2P07093 398 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 IAPPP10997 89 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 LTBRP36941 435 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 LINC01551Q86U37 167 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 ELOVL5Q9NYP7 299 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 A0A1W2PPC4 97 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 PGLYRP1O75594 196 aaPredicted RBP20.76■□□□□ 0.91
SOX1-201ENST00000330949 RABEPKQ7Z6M1 372 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 STPG4Q8N801 248 aa20.76■□□□□ 0.91
SOX1-201ENST00000330949 HMGB3O15347 200 aaKnown RBP20.75■□□□□ 0.91
SOX1-201ENST00000330949 TRAPPC6AO75865 159 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 TUSC2O75896 110 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 OR1D5P58170 312 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 SRSF7Q16629 238 aaKnown RBP eCLIP20.75■□□□□ 0.91
SOX1-201ENST00000330949 RSPO4Q2I0M5 234 aaPredicted RBP20.75■□□□□ 0.91
SOX1-201ENST00000330949 PLEK2Q9NYT0 353 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 RALGAPA1Q6GYQ0 2036 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 UBE2L5PA0A1B0GUS4 154 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 ZNF814B7Z6K7 855 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 GSX1Q9H4S2 264 aaPredicted RBP20.75■□□□□ 0.91
SOX1-201ENST00000330949 UQCR10Q9UDW1 63 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 TP53TG3Q9ULZ0 132 aa20.75■□□□□ 0.91
SOX1-201ENST00000330949 A0A1W2PNR3 127 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 OR2AE1Q8NHA4 323 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 SGMS2Q8NHU3 365 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 SAMD10Q9BYL1 202 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 UBE2ZQ9H832 354 aaPredicted RBP20.74■□□□□ 0.91
SOX1-201ENST00000330949 GALR2O43603 387 aaPredicted RBP20.74■□□□□ 0.91
SOX1-201ENST00000330949 SERF1AO75920 110 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 CRISP2P16562 243 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 COMPP49747 757 aaPredicted RBP20.74■□□□□ 0.91
SOX1-201ENST00000330949 UBE2V1Q13404 147 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 GATAD1Q8WUU5 269 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 RNF2Q99496 336 aa20.74■□□□□ 0.91
SOX1-201ENST00000330949 ZNF552Q9H707 407 aaPredicted RBP20.74■□□□□ 0.91
SOX1-201ENST00000330949 TMPRSS2O15393 492 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 SLC25A53Q5H9E4 307 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 ZNF709Q8N972 641 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 MUC3AQ02505 3323 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 C2CD4DB7Z1M9 353 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 PAGE4O60829 102 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 NRASP01111 189 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 LINC00310P59036 64 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 ATP6V1FQ16864 119 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 TCF23Q7RTU1 214 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 CACNG5Q9UF02 275 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 LAMTOR2Q9Y2Q5 125 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 CD300LBA8K4G0 201 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 KRASP01116 189 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 WNT2P09544 360 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 SCTP09683 121 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 HNF1AP20823 631 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 CLDN17P56750 224 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 SUMO1P63165 101 aaKnown RBP20.73■□□□□ 0.91
SOX1-201ENST00000330949 PLPPR5Q32ZL2 321 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 OR10V1Q8NGI7 309 aa20.73■□□□□ 0.91
SOX1-201ENST00000330949 DOCK11Q5JSL3 2073 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 WDFY4Q6ZS81 3184 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 CTXN2P0C2S0 81 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 SLC38A11Q08AI6 406 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.72■□□□□ 0.91
SOX1-201ENST00000330949 ETFRF1Q6IPR1 90 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 C1QTNF9BB2RNN3 333 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 MMP23AO75900 390 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 MPLP40238 635 aa20.72■□□□□ 0.91
SOX1-201ENST00000330949 C11orf94C9JXX5 98 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 CTRLP40313 264 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 C10orf128Q5T292 105 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 ACSM6Q6P461 480 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 Q6ZRM9 215 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 OR10G9Q8NGN4 311 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 OR10G7Q8NGN6 311 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 LSM10Q969L4 123 aaKnown RBP20.71■□□□□ 0.91
SOX1-201ENST00000330949 ALKBH7Q9BT30 221 aaPredicted RBP20.71■□□□□ 0.91
SOX1-201ENST00000330949 KIR2DS1A0A191URI9 304 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 A0A1W2PN81 502 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 AQP7O14520 342 aa20.71■□□□□ 0.91
SOX1-201ENST00000330949 TOMM40O96008 361 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms